C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil and C2 domain containing 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030320 Cc2d1b-001 ENSMUSG00000028582 10090 + 4:108619940-108634123 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030320
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030320 13.922±2.35 14.861±1.62 10.663±1.88 13.534±3.79 12.326±1.27 11.469±1.65 4.438±0.57 9.323±0.65 5.129±2.26 12.105±1.41 6.030±0.48 10.494±3.38 23.756±4.66 11.469±0.66

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284376 CC2D1B-003 protein_coding Homo_sapiens 0 2494
ENST00000371586 CC2D1B-001 protein_coding Homo_sapiens 0 2422
ENST00000438021 CC2D1B-002 protein_coding Homo_sapiens 0 1853
ENST00000450942 CC2D1B-004 protein_coding Homo_sapiens 0 1857
ENST00000460261 CC2D1B-007 processed_transcript Homo_sapiens 0 1035
ENST00000460370 CC2D1B-010 retained_intron Homo_sapiens 0 449
ENST00000470844 CC2D1B-012 processed_transcript Homo_sapiens 0 305
ENST00000485966 CC2D1B-009 retained_intron Homo_sapiens 0 549
ENST00000491136 CC2D1B-005 retained_intron Homo_sapiens 0 1136

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