C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00022N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122550-ENSG00000136243 CGP 9606 7:23105758-23201011
GeneTranscriptPositionBiotype
ENSG00000122550 (KLHL7)
kelch-like family member 7 		ENST00000322275 (KLHL7-004) 23105785-23126045 protein_coding
ENST00000339077 (KLHL7-002) 23105784-23177914 protein_coding
ENST00000409689 (KLHL7-008) 23106295-23175388 protein_coding
ENST00000410047 (KLHL7-003) 23106298-23126043 protein_coding
ENST00000414163 (KLHL7-013) 23143929-23156168 protein_coding
ENST00000459661 (KLHL7-009) 23105790-23140784 processed_transcript
ENST00000469576 (KLHL7-011) 23165875-23168102 retained_intron
ENST00000469845 (KLHL7-012) 23172789-23174192 retained_intron
ENST00000477076 (KLHL7-006) 23124980-23126049 retained_intron
ENST00000479288 (KLHL7-010) 23105758-23143901 processed_transcript
ENST00000479700 (KLHL7-007) 23106656-23125887 processed_transcript
ENST00000491352 (KLHL7-005) 23106117-23125202 retained_intron
ENST00000521082 (KLHL7-001) 23105758-23175302 nonsense_mediated_decay
ENSG00000136243 (NUPL2)
nucleoporin like 2 		ENST00000258742 (NUPL2-001) 23181827-23201009 protein_coding
ENST00000410002 (NUPL2-008) 23182038-23188219 protein_coding
ENST00000413919 (NUPL2-002) 23182064-23200705 protein_coding
ENST00000437140 (NUPL2-005) 23182066-23200967 nonsense_mediated_decay
ENST00000438012 (NUPL2-003) 23182024-23201006 nonsense_mediated_decay
ENST00000477844 (NUPL2-006) 23194403-23201011 retained_intron
ENST00000485250 (NUPL2-004) 23181841-23200955 retained_intron
ENST00000486136 (NUPL2-010) 23187073-23197284 retained_intron
ENST00000487595 (NUPL2-009) 23182049-23196442 processed_transcript
ENST00000489145 (NUPL2-011) 23199424-23200824 retained_intron
ENST00000497500 (NUPL2-007) 23182038-23187392 retained_intron
ENST00000548367 (NUPL2-201) 23194924-23198399 protein_coding
ENSG00000230042 (AK3P3)
adenylate kinase 3 pseudogene 3 		ENST00000431883 (AK3P3-001) 23129178-23129841 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00022N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028986-ENSMUSG00000048439 CGP 10090 5:24100590-24184013
GeneTranscriptPositionBiotype
ENSMUSG00000028986 (Klhl7)
kelch-like 7 		ENSMUST00000030841 (Klhl7-201) 24100590-24161223 protein_coding
ENSMUST00000163409 (Klhl7-202) 24100590-24161223 protein_coding
ENSMUSG00000048439 (Nupl2)
nucleoporin like 2 		ENSMUST00000049887 (Nupl2-001) 24164963-24184013 protein_coding
ENSMUST00000115101 (Nupl2-002) 24165000-24182837 nonsense_mediated_decay
ENSMUST00000124150 (Nupl2-004) 24177904-24181432 processed_transcript
ENSMUST00000147392 (Nupl2-003) 24167508-24169881 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022N_0001ENSG00000122550ENST00000322275ENST00000339077ENST00000409689ENST00000410047ENST00000414163ENST00000459661ENST00000469576ENST00000469845ENST00000477076ENST00000479288ENST00000479700ENST00000491352ENST00000521082ENSG00000136243ENST00000258742ENST00000410002ENST00000413919ENST00000437140ENST00000438012ENST00000477844ENST00000485250ENST00000486136ENST00000487595ENST00000489145ENST00000497500ENST00000548367ENSG00000230042ENST00000431883CIL_00022N_0002ENSMUSG00000028986ENSMUST00000030841ENSMUST00000163409ENSMUSG00000048439ENSMUST00000049887ENSMUST00000115101ENSMUST00000124150ENSMUST00000147392
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022N_0001ENSG00000122550ENST00000322275ENST00000339077ENST00000409689ENST00000469576ENST00000469845ENST00000521082ENSG00000136243ENST00000258742ENST00000410002ENST00000413919ENST00000437140ENST00000438012ENST00000477844ENST00000485250ENST00000487595ENST00000489145ENST00000497500ENSG00000230042ENST00000431883CIL_00022N_0002ENSMUSG00000028986ENSMUST00000030841ENSMUST00000163409ENSMUSG00000048439ENSMUST00000049887ENSMUST00000115101ENSMUST00000147392
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122550 ENST00000322275 N/A N/A 0.704±0.00 N/A N/A N/A N/A N/A N/A 3.009±0.19 N/A 2.675±1.83 2.025±0.03 14.971±1.93
ENST00000339077 N/A 0.445±0.00 N/A 0.338±0.00 N/A N/A N/A N/A 0.137±0.00 N/A 0.210±0.00 N/A N/A N/A
ENST00000409689 1.294±0.00 1.176±0.00 0.673±0.00 2.710±1.63 1.693±1.07 1.142±0.71 4.495±2.77 N/A 1.137±0.13 1.383±0.00 0.531±0.10 3.084±2.01 1.715±0.05 4.680±1.27
ENST00000410047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469576 N/A N/A 3.850±0.00 N/A N/A N/A N/A N/A N/A N/A 3.540±0.00 N/A N/A N/A
ENST00000469845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.590±0.00 19.229±0.00 42.565±0.00
ENST00000477076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521082 3.236±0.00 1.747±0.00 N/A 4.922±2.44 1.745±0.66 3.058±1.43 6.645±3.70 1.019±0.00 0.605±0.37 3.015±0.00 0.935±0.00 2.234±1.04 1.896±0.99 6.383±0.00
ENSG00000136243 ENST00000258742 1.662±0.00 N/A 0.279±0.00 1.301±0.00 2.099±0.16 2.742±0.00 1.755±1.15 1.855±0.00 2.199±0.00 0.722±0.24 0.849±0.00 3.056±1.60 1.584±0.19 4.643±1.35
ENST00000410002 N/A N/A 0.672±0.00 N/A N/A N/A N/A N/A 2.033±0.00 N/A 1.412±0.00 N/A 1.276±0.00 N/A
ENST00000413919 N/A 2.658±0.00 N/A 2.233±0.00 1.642±0.00 N/A N/A N/A N/A 0.999±0.00 N/A 1.393±0.00 N/A 3.382±0.21
ENST00000437140 N/A N/A N/A N/A N/A N/A N/A 2.452±0.00 N/A 0.749±0.00 N/A 2.658±1.04 0.886±0.11 N/A
ENST00000438012 N/A N/A N/A N/A N/A N/A N/A 1.320±0.00 1.356±0.00 N/A 0.458±0.00 N/A N/A N/A
ENST00000477844 0.319±0.00 N/A N/A 0.589±0.00 0.720±0.10 0.641±0.04 0.613±0.00 0.847±0.02 1.024±0.00 1.411±0.00 0.190±0.00 0.681±0.12 0.266±0.00 N/A
ENST00000485250 N/A N/A N/A 0.868±0.00 N/A N/A N/A N/A N/A N/A N/A 0.660±0.00 0.421±0.00 N/A
ENST00000486136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487595 1.666±0.00 N/A N/A 4.052±0.00 N/A 4.567±0.00 1.104±0.00 N/A 2.276±0.00 2.930±0.00 0.715±0.00 5.473±0.00 N/A 11.153±0.00
ENST00000489145 N/A N/A 0.788±0.00 2.839±0.00 N/A N/A 2.438±0.00 2.676±0.00 2.271±0.00 1.802±0.00 1.785±0.21 3.835±0.00 1.874±0.00 5.325±0.00
ENST00000497500 1.132±0.00 4.176±0.00 N/A 2.546±0.00 1.981±0.00 N/A 0.726±0.00 1.267±0.00 1.166±0.00 0.855±0.00 N/A 4.315±0.00 N/A N/A
ENST00000548367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230042 ENST00000431883 0.082±0.00 0.043±0.00 0.431±0.00 0.661±0.44 0.847±0.37 0.198±0.10 1.757±0.15 N/A N/A 0.299±0.18 N/A 0.490±0.20 0.103±0.02 0.976±0.59
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028986 ENSMUST00000030841 5.399±1.06 2.128±0.47 8.361±4.22 29.523±12.92 3.051±0.52 1.824±0.55 4.784±0.95 4.916±0.47 4.553±3.48 4.748±0.66 6.247±2.96 4.654±3.14 2.259±0.80 11.123±3.14
ENSMUST00000163409 N/A 2.428±0.00 N/A N/A N/A 0.796±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048439 ENSMUST00000049887 1.313±0.72 0.803±0.31 2.182±0.02 2.057±0.90 1.240±0.32 1.472±0.30 0.969±0.21 1.050±0.33 1.750±0.57 0.970±0.18 1.264±0.35 1.464±0.60 1.523±0.67 6.873±1.82
ENSMUST00000115101 1.808±0.88 3.795±0.78 1.375±0.44 1.224±0.40 1.722±0.70 2.023±0.68 1.539±0.42 0.614±0.21 0.862±0.46 1.333±0.29 0.898±0.24 2.342±0.91 1.299±0.63 21.492±6.29
ENSMUST00000124150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.733±0.00 0.945±0.00 N/A

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