C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAD2 mitotic arrest deficient-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030860 Mad2l2-003 ENSMUSG00000029003 10090 + 4:148140182-148145699 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030860
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030860 8.286±0.97 12.235±2.30 7.001±1.45 15.796±0.00 12.590±2.10 6.347±1.74 3.972±1.95 6.406±2.43 12.850±8.18 9.604±1.84 3.140±1.42 8.857±4.69 4.478±1.10 58.035±25.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0002 VISTA 4:147665245-148272946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001102 IEA RNA polymerase II activating transcription factor binding
GO:0001558 IEA regulation of cell growth
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005680 IEA anaphase-promoting complex
GO:0005737 IEA cytoplasm
GO:0005819 ISS spindle
GO:0006302 IEA double-strand break repair
GO:0006351 IEA transcription, DNA-templated
GO:0007015 IEA actin filament organization
GO:0007067 IEA mitotic nuclear division
GO:0008432 ISS JUN kinase binding
GO:0010719 IEA negative regulation of epithelial to mesenchymal transition
GO:0010944 IEA negative regulation of transcription by competitive promoter binding
GO:0016035 ISS zeta DNA polymerase complex
GO:0033138 ISS positive regulation of peptidyl-serine phosphorylation
GO:0042177 IEA negative regulation of protein catabolic process
GO:0042772 ISS DNA damage response, signal transduction resulting in transcription
GO:0043433 IEA negative regulation of sequence-specific DNA binding transcription factor activity
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0060564 ISS negative regulation of mitotic anaphase-promoting complex activity
GO:0090090 IEA negative regulation of canonical Wnt signaling pathway
GO:2000048 IEA negative regulation of cell-cell adhesion mediated by cadherin
GO:2000678 IEA negative regulation of transcription regulatory region DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000235310 MAD2L2-001 protein_coding Homo_sapiens 0 811
ENST00000376655 MAD2L2-005 retained_intron Homo_sapiens 0 318
ENST00000376664 MAD2L2-008 retained_intron Homo_sapiens 0 555
ENST00000376667 MAD2L2-003 protein_coding Homo_sapiens 0 811
ENST00000376669 MAD2L2-002 protein_coding Homo_sapiens 0 453
ENST00000376672 MAD2L2-004 protein_coding Homo_sapiens 0 453
ENST00000376692 MAD2L2-201 protein_coding Homo_sapiens 0 811
ENST00000456915 MAD2L2-006 protein_coding Homo_sapiens 0 641

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