C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 30 (zinc transporter), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031037 Slc30a3-001 ENSMUSG00000029151 10090 - 5:31086106-31093615 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000031037
Transcript ID Brain Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000031037 9.076±4.32 0.013±0.00 0.076±0.01 0.179±0.11 0.041±0.00 1.541±0.41 0.250±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EG CIL_0000EG_0002 CGP 5:31054780-31108237
CIL_0000EF CIL_0000EF_0002 CGP 5:31086106-31112526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005770 IEA late endosome
GO:0006829 TAS zinc ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0010312 TAS detoxification of zinc ion
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030672 IDA synaptic vesicle membrane
GO:0032119 TAS sequestering of zinc ion
GO:0043005 IDA neuron projection
GO:0051050 IGI positive regulation of transport
GO:0061088 TAS regulation of sequestering of zinc ion
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233535 SLC30A3-001 protein_coding Homo_sapiens 0 1528
ENST00000424577 SLC30A3-004 protein_coding Homo_sapiens 0 555
ENST00000426569 SLC30A3-006 protein_coding Homo_sapiens 0 366
ENST00000426924 SLC30A3-007 protein_coding Homo_sapiens 0 697
ENST00000432351 SLC30A3-005 protein_coding Homo_sapiens 0 870
ENST00000445870 SLC30A3-002 protein_coding Homo_sapiens 0 564
ENST00000450118 SLC30A3-003 protein_coding Homo_sapiens 0 414
ENST00000482990 SLC30A3-010 retained_intron Homo_sapiens 0 444
ENST00000486309 SLC30A3-008 retained_intron Homo_sapiens 0 444
ENST00000497341 SLC30A3-009 retained_intron Homo_sapiens 0 715

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