C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031061 Dhx15-201 ENSMUSG00000029169 10090 - 5:52150209-52190519 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031061
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031061 18.345±6.12 15.863±3.88 28.356±4.96 35.988±11.12 17.578±2.45 13.619±2.46 10.527±1.19 17.374±1.59 28.079±17.22 19.998±0.88 10.215±1.76 26.233±11.50 38.848±12.35 17.083±3.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033R CIL_00033R_0003 CGP 5:51454249-52190519
CIL_0007NU CIL_0007NU_0002 UCNEbase 5:51478478-52157811
CIL_0002OT CIL_0002OT_0002 CGP 5:52150209-52371405

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 ISO double-stranded RNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005689 ISS U12-type spliceosomal complex
GO:0006200 IEA ATP catabolic process
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding
GO:0071008 IEA U2-type post-mRNA release spliceosomal complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336812 DHX15-001 protein_coding Homo_sapiens 0 4324
ENST00000503562 DHX15-007 retained_intron Homo_sapiens 0 501
ENST00000504279 DHX15-009 processed_transcript Homo_sapiens 0 730
ENST00000508032 DHX15-002 processed_transcript Homo_sapiens 0 1760
ENST00000508368 DHX15-008 processed_transcript Homo_sapiens 0 556
ENST00000510645 DHX15-010 processed_transcript Homo_sapiens 0 411
ENST00000512903 DHX15-003 processed_transcript Homo_sapiens 0 1543
ENST00000513036 DHX15-004 processed_transcript Homo_sapiens 0 1236

Loading