C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box helicase 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336812 DHX15-001 ENSG00000109606 9606 - 4:24527475-24584550 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336812
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336812 20.892±0.00 19.631±0.00 1.201±0.00 9.337±2.80 8.897±5.40 16.008±5.00 7.989±6.30 16.910±8.78 8.923±2.63 22.216±0.00 8.164±4.32 20.264±7.04 23.557±3.68 28.356±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033R CIL_00033R_0002 CGP 4:23755041-24584550
CIL_0007NU CIL_0007NU_0001 UCNEbase 4:23818229-24537409
CIL_0002OT CIL_0002OT_0001 CGP 4:24517441-24800842

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003724 TAS RNA helicase activity
GO:0003725 IDA double-stranded RNA binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005689 IDA U12-type spliceosomal complex
GO:0006200 IEA ATP catabolic process
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008380 IC RNA splicing
GO:0044822 IDA poly(A) RNA binding
GO:0071008 IDA U2-type post-mRNA release spliceosomal complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031061 Dhx15-201 protein_coding Mus_musculus 0 4324

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