C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002OT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109606-ENSG00000109610 CGP 9606 4:24517441-24800842
GeneTranscriptPositionBiotype
ENSG00000109606 (DHX15)
DEAH (Asp-Glu-Ala-His) box helicase 15 		ENST00000336812 (DHX15-001) 24527475-24584550 protein_coding
ENST00000503562 (DHX15-007) 24539709-24541899 retained_intron
ENST00000504279 (DHX15-009) 24527760-24530079 processed_transcript
ENST00000508032 (DHX15-002) 24527475-24539150 processed_transcript
ENST00000508368 (DHX15-008) 24527714-24532950 processed_transcript
ENST00000510645 (DHX15-010) 24517441-24532951 processed_transcript
ENST00000511553 (DHX15-006) 24576469-24584282 processed_transcript
ENST00000512903 (DHX15-003) 24527477-24534199 processed_transcript
ENST00000513036 (DHX15-004) 24527477-24530883 processed_transcript
ENST00000513092 (DHX15-005) 24576550-24584537 processed_transcript
ENSG00000109610 (SOD3)
superoxide dismutase 3, extracellular 		ENST00000382120 (SOD3-001) 24795463-24800842 protein_coding
ENST00000593742 (SOD3-003) 24789947-24790606 retained_intron
ENST00000598411 (SOD3-002) 24789912-24799683 protein_coding
ENSG00000207697 (MIR573)
microRNA 573 		ENST00000384964 (MIR573-201) 24520192-24520290 miRNA
ENSG00000243005 (RN7SL16P)
RNA, 7SL, cytoplasmic 16, pseudogene 		ENST00000476316 (RN7SL16P-201) 24563193-24563461 misc_RNA
ENSG00000248444 (HNRNPA1P65)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 65 		ENST00000508873 (HNRNPA1P65-001) 24771467-24772420 processed_pseudogene
ENSG00000249256 (ATP5LP3)
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit g, pseudogene 3 		ENST00000514223 (ATP5LP3-001) 24658072-24658375 processed_pseudogene
ENSG00000251638 (AC006390.4)
 ENST00000508068 (AC006390.4-001) 24768049-24768331 processed_pseudogene
ENSG00000261121 (RP11-496D24.2)
 ENST00000569621 (RP11-496D24.2-001) 24659856-24671568 lincRNA
CIL_0002OT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029169-ENSMUSG00000072941 CGP 10090 5:52150209-52371405
GeneTranscriptPositionBiotype
ENSMUSG00000029169 (Dhx15)
DEAH (Asp-Glu-Ala-His) box polypeptide 15 		ENSMUST00000031061 (Dhx15-201) 52150209-52190519 protein_coding
ENSMUSG00000072941 (Sod3)
superoxide dismutase 3, extracellular 		ENSMUST00000101208 (Sod3-201) 52363946-52371405 protein_coding
ENSMUSG00000097145 (9230114K14Rik)
RIKEN cDNA 9230114K14 gene 		ENSMUST00000180601 (9230114K14Rik-201) 52190681-52197984 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OT_0001ENSG00000109606ENST00000336812ENST00000503562ENST00000504279ENST00000508032ENST00000508368ENST00000510645ENST00000511553ENST00000512903ENST00000513036ENST00000513092ENSG00000109610ENST00000382120ENST00000593742ENST00000598411ENSG00000207697ENST00000384964ENSG00000243005ENST00000476316ENSG00000248444ENST00000508873ENSG00000249256ENST00000514223ENSG00000251638ENST00000508068ENSG00000261121ENST00000569621CIL_0002OT_0002ENSMUSG00000029169ENSMUST00000031061ENSMUSG00000072941ENSMUST00000101208ENSMUSG00000097145ENSMUST00000180601
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OT_0001ENSG00000109606ENST00000336812ENST00000508032ENST00000512903ENSG00000109610ENST00000382120ENST00000598411ENSG00000207697ENST00000384964ENSG00000243005ENST00000476316ENSG00000248444ENST00000508873ENSG00000249256ENST00000514223ENSG00000251638ENST00000508068ENSG00000261121ENST00000569621CIL_0002OT_0002ENSMUSG00000029169ENSMUST00000031061ENSMUSG00000072941ENSMUST00000101208ENSMUSG00000097145ENSMUST00000180601
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109606 ENST00000336812 20.892±0.00 19.631±0.00 1.201±0.00 9.337±2.80 8.897±5.40 16.008±5.00 7.989±6.30 16.910±8.78 8.923±2.63 22.216±0.00 8.164±4.32 20.264±7.04 23.557±3.68 28.356±1.04
ENST00000503562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508032 N/A N/A N/A N/A 1.652±0.00 N/A 1.565±0.00 2.088±0.35 N/A 2.623±0.00 N/A 5.581±0.36 N/A N/A
ENST00000508368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512903 N/A N/A 1.966±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000109610 ENST00000382120 262.817±0.00 15.427±0.00 8.143±0.00 11.111±9.06 5.241±0.00 20.337±16.52 18.837±17.66 27.963±27.88 6.264±0.55 24.465±20.66 10.507±8.61 26.194±20.18 136.622±46.64 91.597±61.73
ENST00000593742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598411 N/A N/A N/A N/A 3.368±0.00 N/A N/A N/A N/A 3.194±0.00 N/A 29.440±0.00 145.972±0.00 32.763±0.00
ENSG00000207697 ENST00000384964 N/A N/A N/A N/A N/A N/A 1.550±0.00 1.306±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000243005 ENST00000476316 N/A 0.493±0.00 N/A 0.225±0.00 0.361±0.21 N/A N/A 0.579±0.00 N/A N/A N/A 0.311±0.14 0.158±0.00 0.396±0.00
ENSG00000248444 ENST00000508873 N/A 0.043±0.00 N/A 0.073±0.00 0.029±0.00 0.013±0.00 N/A 0.014±0.00 N/A 0.014±0.00 N/A 0.076±0.00 N/A N/A
ENSG00000249256 ENST00000514223 N/A N/A N/A N/A N/A N/A 0.057±0.00 0.305±0.00 N/A N/A N/A N/A 0.150±0.00 0.111±0.00
ENSG00000251638 ENST00000508068 N/A N/A N/A 0.156±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261121 ENST00000569621 0.054±0.00 0.184±0.00 N/A 0.511±0.00 0.197±0.03 0.120±0.00 0.046±0.01 0.043±0.00 N/A 0.096±0.09 0.043±0.00 0.097±0.00 0.037±0.01 0.214±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029169 ENSMUST00000031061 18.345±6.12 15.863±3.88 28.356±4.96 35.988±11.12 17.578±2.45 13.619±2.46 10.527±1.19 17.374±1.59 28.079±17.22 19.998±0.88 10.215±1.76 26.233±11.50 38.848±12.35 17.083±3.62
ENSMUSG00000072941 ENSMUST00000101208 73.688±45.51 322.983±6.37 11.686±0.03 0.501±0.23 71.904±24.66 25.703±2.03 12.569±3.94 160.681±16.55 12.547±9.23 166.490±19.82 1.473±0.30 44.905±17.71 6.298±4.81 8.039±2.86
ENSMUSG00000097145 ENSMUST00000180601 0.254±0.07 0.181±0.07 0.561±0.00 0.239±0.04 0.199±0.09 0.273±0.11 0.222±0.00 0.264±0.10 0.254±0.19 0.123±0.04 0.413±0.00 0.262±0.21 0.461±0.22 0.357±0.09

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