C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras homolog gene family, member H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031106 Rhoh-201 ENSMUSG00000029204 10090 + 5:65863569-65896700 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031106
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031106 0.411±0.15 0.108±0.05 0.214±0.03 0.061±0.01 4.251±1.85 0.513±0.10 0.157±0.08 0.227±0.15 0.251±0.21 0.895±0.19 0.093±0.18 0.402±0.15 0.064±0.03 0.140±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LM CIL_0005LM_0003 CGP 5:65763521-65896700
CIL_0005LL CIL_0005LL_0003 CGP 5:65863569-65977326

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001772 IDA immunological synapse
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0019210 IEA kinase inhibitor activity
GO:0030217 IDA T cell differentiation
GO:0042326 IEA negative regulation of phosphorylation
GO:0043124 IEA negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045576 IDA mast cell activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381799 RHOH-001 protein_coding Homo_sapiens 0 806
ENST00000503941 RHOH-005 protein_coding Homo_sapiens 0 459
ENST00000505618 RHOH-016 protein_coding Homo_sapiens 0 806
ENST00000507851 RHOH-006 protein_coding Homo_sapiens 0 481
ENST00000610353 RHOH-201 protein_coding Homo_sapiens 0 806
ENST00000613272 RHOH-202 protein_coding Homo_sapiens 0 806
ENST00000614836 RHOH-203 protein_coding Homo_sapiens 0 806
ENST00000615083 RHOH-204 protein_coding Homo_sapiens 0 806
ENST00000615577 RHOH-205 protein_coding Homo_sapiens 0 806
ENST00000617441 RHOH-206 protein_coding Homo_sapiens 0 806
ENST00000619474 RHOH-207 protein_coding Homo_sapiens 0 806
ENST00000622175 RHOH-208 protein_coding Homo_sapiens 0 806

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