C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005LL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070121-ENSDARG00000054680 CGP 7955 1:22172499-22192005
GeneTranscriptPositionBiotype
ENSDARG00000054680 (chrna9)
cholinergic receptor, nicotinic, alpha 9 		ENSDART00000077335 (chrna9-201) 22182712-22191655 protein_coding
ENSDART00000140706 (chrna9-001) 22182716-22192005 protein_coding
ENSDARG00000070121 (rhoh)
ras homolog gene family, member H 		ENSDART00000102646 (rhoh-001) 22172499-22173086 protein_coding
ENSDART00000156740 (rhoh-201) 22172517-22173080 protein_coding
CIL_0005LL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168421-ENSG00000174343 CGP 9606 4:40191053-40355217
GeneTranscriptPositionBiotype
ENSG00000168421 (RHOH)
ras homolog family member H 		ENST00000381799 (RHOH-001) 40196907-40246967 protein_coding
ENST00000503754 (RHOH-002) 40192968-40243257 processed_transcript
ENST00000503941 (RHOH-005) 40193663-40243695 protein_coding
ENST00000503978 (RHOH-015) 40200345-40243252 processed_transcript
ENST00000504638 (RHOH-013) 40197245-40243187 processed_transcript
ENST00000505618 (RHOH-016) 40191053-40243995 protein_coding
ENST00000507851 (RHOH-006) 40192967-40243713 protein_coding
ENST00000508513 (RHOH-004) 40192990-40243434 protein_coding
ENST00000511121 (RHOH-014) 40200344-40243405 protein_coding
ENST00000511967 (RHOH-003) 40193046-40243221 processed_transcript
ENST00000513894 (RHOH-008) 40196995-40243193 processed_transcript
ENST00000514143 (RHOH-012) 40197061-40209669 processed_transcript
ENST00000514839 (RHOH-007) 40196989-40218180 processed_transcript
ENST00000515503 (RHOH-011) 40197058-40243210 processed_transcript
ENST00000515702 (RHOH-009) 40197033-40242801 processed_transcript
ENST00000515718 (RHOH-010) 40197034-40243309 processed_transcript
ENST00000610353 (RHOH-201) 40196907-40244764 protein_coding
ENST00000613272 (RHOH-202) 40192967-40244764 protein_coding
ENST00000614836 (RHOH-203) 40196907-40244764 protein_coding
ENST00000615083 (RHOH-204) 40196907-40244764 protein_coding
ENST00000615577 (RHOH-205) 40192967-40244764 protein_coding
ENST00000617441 (RHOH-206) 40193649-40244764 protein_coding
ENST00000619474 (RHOH-207) 40196907-40244764 protein_coding
ENST00000622175 (RHOH-208) 40196907-40244764 protein_coding
ENSG00000174343 (CHRNA9)
cholinergic receptor, nicotinic, alpha 9 (neuronal) 		ENST00000310169 (CHRNA9-001) 40335329-40355217 protein_coding
ENST00000502377 (CHRNA9-003) 40337286-40348139 processed_transcript
ENST00000509518 (CHRNA9-002) 40349587-40354094 processed_transcript
ENSG00000249241 (AC195454.1)
 ENST00000510551 (AC195454.1-001) 40316485-40330419 lincRNA
ENSG00000250338 (RP11-395I6.2)
 ENST00000515422 (RP11-395I6.2-001) 40265472-40266457 lincRNA
CIL_0005LL_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029204-ENSMUSG00000029205 CGP 10090 5:65863569-65977326
GeneTranscriptPositionBiotype
ENSMUSG00000029204 (Rhoh)
ras homolog gene family, member H 		ENSMUST00000031106 (Rhoh-201) 65863569-65896700 protein_coding
ENSMUSG00000029205 (Chrna9)
cholinergic receptor, nicotinic, alpha polypeptide 9 		ENSMUST00000031108 (Chrna9-001) 65967124-65977326 protein_coding
ENSMUST00000123357 (Chrna9-003) 65934921-65969160 protein_coding
ENSMUST00000126313 (Chrna9-007) 65975896-65977140 processed_transcript
ENSMUST00000128613 (Chrna9-006) 65934948-65935914 retained_intron
ENSMUST00000141080 (Chrna9-004) 65934975-65944350 processed_transcript
ENSMUST00000145599 (Chrna9-005) 65934973-65944342 processed_transcript
ENSMUST00000153624 (Chrna9-002) 65934928-65971238 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005LL_0001ENSDARG00000054680ENSDART00000077335ENSDART00000140706ENSDARG00000070121ENSDART00000102646ENSDART00000156740CIL_0005LL_0002ENSG00000168421ENST00000381799ENST00000503754ENST00000503941ENST00000503978ENST00000504638ENST00000505618ENST00000507851ENST00000508513ENST00000511121ENST00000511967ENST00000513894ENST00000514143ENST00000514839ENST00000515503ENST00000515702ENST00000515718ENST00000610353ENST00000613272ENST00000614836ENST00000615083ENST00000615577ENST00000617441ENST00000619474ENST00000622175ENSG00000174343ENST00000310169ENST00000502377ENST00000509518ENSG00000249241ENST00000510551ENSG00000250338ENST00000515422CIL_0005LL_0003ENSMUSG00000029204ENSMUST00000031106ENSMUSG00000029205ENSMUST00000031108ENSMUST00000123357ENSMUST00000126313ENSMUST00000128613ENSMUST00000141080ENSMUST00000145599ENSMUST00000153624
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005LL_0001ENSDARG00000054680ENSDART00000077335ENSDART00000140706ENSDARG00000070121ENSDART00000102646ENSDART00000156740CIL_0005LL_0002ENSG00000168421ENST00000381799ENST00000503941ENST00000505618ENST00000507851ENST00000508513ENST00000511121ENST00000511967ENST00000514143ENST00000610353ENST00000613272ENST00000614836ENST00000617441ENSG00000174343ENST00000310169ENST00000509518ENSG00000249241ENST00000510551ENSG00000250338ENST00000515422CIL_0005LL_0003ENSMUSG00000029204ENSMUST00000031106ENSMUSG00000029205ENSMUST00000031108ENSMUST00000126313ENSMUST00000128613ENSMUST00000145599ENSMUST00000153624
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054680 ENSDART00000077335 N/A N/A N/A 0.020±0.00 N/A N/A 0.036±0.00 0.090±0.00 N/A N/A 0.045±0.00 N/A N/A N/A
ENSDART00000140706 N/A N/A N/A 0.079±0.03 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000070121 ENSDART00000102646 N/A N/A N/A N/A N/A N/A 1.081±0.15 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156740 N/A N/A N/A 0.580±0.41 N/A N/A N/A N/A N/A N/A 0.494±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168421 ENST00000381799 0.071±0.00 1.708±0.00 N/A N/A N/A N/A N/A N/A N/A 0.270±0.00 N/A 0.074±0.00 0.015±0.00 0.012±0.00
ENST00000503754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503941 N/A N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A 2.805±0.00 N/A 0.359±0.25 N/A 0.079±0.00
ENST00000503978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505618 N/A N/A N/A 0.119±0.00 N/A 0.325±0.20 N/A N/A N/A 2.538±0.00 N/A 0.633±0.00 0.250±0.00 N/A
ENST00000507851 N/A N/A N/A N/A N/A N/A 0.206±0.00 N/A 0.307±0.00 N/A N/A 0.117±0.00 N/A N/A
ENST00000508513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.278±0.00 0.116±0.00 N/A
ENST00000511121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 N/A N/A N/A
ENST00000511967 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.126±0.00 N/A N/A N/A N/A
ENST00000513894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514143 N/A N/A N/A N/A N/A 0.377±0.00 N/A N/A N/A N/A 0.205±0.00 N/A N/A N/A
ENST00000514839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610353 N/A N/A N/A N/A 0.315±0.00 N/A 0.061±0.00 0.115±0.00 N/A N/A N/A N/A N/A N/A
ENST00000613272 N/A 4.873±0.00 0.021±0.00 N/A N/A 0.664±0.00 N/A 0.195±0.00 N/A 0.621±0.00 N/A 0.237±0.00 0.145±0.01 0.118±0.00
ENST00000614836 0.086±0.00 4.924±0.00 N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A N/A 0.193±0.03 0.181±0.00 N/A
ENST00000615083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617441 0.148±0.00 N/A 0.008±0.00 N/A N/A 0.133±0.00 N/A 0.081±0.00 0.173±0.00 1.032±0.00 0.017±0.00 0.245±0.01 0.411±0.12 0.365±0.00
ENST00000619474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174343 ENST00000310169 N/A 0.038±0.00 N/A 0.015±0.00 0.010±0.00 N/A 0.005±0.00 N/A N/A 0.009±0.00 N/A 0.021±0.01 0.060±0.03 0.015±0.00
ENST00000502377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509518 N/A 0.091±0.00 N/A 0.013±0.00 N/A N/A N/A 0.120±0.00 N/A N/A N/A N/A N/A 0.082±0.00
ENSG00000249241 ENST00000510551 N/A N/A N/A 0.161±0.00 0.060±0.00 N/A N/A N/A N/A 0.405±0.24 N/A 0.436±0.00 0.031±0.00 0.053±0.01
ENSG00000250338 ENST00000515422 0.097±0.00 0.268±0.00 N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029204 ENSMUST00000031106 0.411±0.15 0.108±0.05 0.214±0.03 0.061±0.01 4.251±1.85 0.513±0.10 0.157±0.08 0.227±0.15 0.251±0.21 0.895±0.19 0.093±0.18 0.402±0.15 0.064±0.03 0.140±0.05
ENSMUSG00000029205 ENSMUST00000031108 N/A N/A 0.011±0.00 0.004±0.00 0.054±0.02 N/A N/A N/A N/A 0.192±0.17 0.079±0.05 N/A 0.182±0.03 0.327±0.00
ENSMUST00000123357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126313 N/A 0.144±0.00 0.034±0.01 0.013±0.00 N/A 0.140±0.01 N/A 0.079±0.01 N/A 0.104±0.00 0.107±0.04 0.259±0.08 0.728±0.21 1.760±0.00
ENSMUST00000128613 N/A N/A N/A N/A 0.124±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145599 N/A N/A N/A N/A 0.525±0.13 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153624 N/A N/A N/A N/A 0.091±0.03 0.057±0.00 N/A N/A 0.012±0.00 0.250±0.00 0.075±0.03 N/A N/A 1.303±0.48

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