C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane protein 165
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031144 Tmem165-001 ENSMUSG00000029234 10090 + 5:76183880-76209245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031144
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031144 31.996±11.03 11.080±1.57 28.878±4.71 15.400±9.40 15.329±1.58 38.126±11.02 8.353±0.54 15.889±2.74 12.861±8.50 31.086±4.62 4.748±0.84 28.748±16.99 59.829±29.75 10.019±4.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025I CIL_00025I_0002 CGP 5:76140271-76209245
CIL_00025L CIL_00025L_0002 CGP 5:76183880-76304548

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005765 ISS lysosomal membrane
GO:0005794 ISS Golgi apparatus
GO:0006487 ISS protein N-linked glycosylation
GO:0006874 ISS cellular calcium ion homeostasis
GO:0010008 ISS endosome membrane
GO:0016021 IEA integral component of membrane
GO:0032472 ISS Golgi calcium ion transport
GO:0032588 ISS trans-Golgi network membrane
GO:0035751 ISS regulation of lysosomal lumen pH
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381334 TMEM165-001 protein_coding Homo_sapiens 0 1273
ENST00000506198 TMEM165-006 protein_coding Homo_sapiens 0 363
ENST00000508404 TMEM165-002 nonsense_mediated_decay Homo_sapiens 0 1027
ENST00000508561 TMEM165-009 processed_transcript Homo_sapiens 0 287
ENST00000509575 TMEM165-010 retained_intron Homo_sapiens 0 342
ENST00000511710 TMEM165-007 processed_transcript Homo_sapiens 0 440
ENST00000514904 TMEM165-003 processed_transcript Homo_sapiens 0 747
ENST00000515591 TMEM165-004 retained_intron Homo_sapiens 0 351
ENST00000608091 TMEM165-013 protein_coding Homo_sapiens 0 486

Loading