C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuromedin U
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031146 Nmu-001 ENSMUSG00000029236 10090 - 5:76333495-76363788 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverLungOvaryPlacentaENSMUST00000031146
Transcript ID Brain Breast Colon Liver Lung Ovary Placenta
ENSMUST00000031146 0.042±0.02 0.060±0.01 6.859±1.43 0.012±0.00 1.878±0.24 0.340±0.20 0.030±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025F CIL_00025F_0002 CGP 5:76312115-76363788
CIL_00025E CIL_00025E_0002 CGP 5:76333495-76570294

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001696 IEA gastric acid secretion
GO:0005576 IEA extracellular region
GO:0007218 ISO neuropeptide signaling pathway
GO:0009648 IEA photoperiodism
GO:0019233 IEA sensory perception of pain
GO:0042755 IEA eating behavior
GO:0042922 ISO neuromedin U receptor binding
GO:0043195 IEA terminal bouton
GO:0045987 IEA positive regulation of smooth muscle contraction
GO:0046887 IEA positive regulation of hormone secretion
GO:0050806 IEA positive regulation of synaptic transmission

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264218 NMU-001 protein_coding Homo_sapiens 0 433
ENST00000505262 NMU-005 protein_coding Homo_sapiens 9.00054e-42 174
ENST00000511469 NMU-002 protein_coding Homo_sapiens 0 300
ENST00000515325 NMU-006 processed_transcript Homo_sapiens 8e-37 158

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