C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secreted phosphoprotein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031243 Spp1-001 ENSMUSG00000029304 10090 + 5:104435118-104441050 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031243
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031243 5.798±3.99 22.884±7.80 0.409±0.01 4.633±1.95 4.592±1.53 0.591±0.42 0.666±0.15 1090.210±76.77 16.557±18.31 67.384±17.73 1.611±0.64 22.401±6.78 53.154±38.80 0.255±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BJ CIL_0000BJ_0002 CGP 5:104325329-104441050
CIL_0000BK CIL_0000BK_0002 CGP 5:104435118-104505819

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005125 NAS cytokine activity
GO:0005576 NAS extracellular region
GO:0005737 IDA cytoplasm
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030593 IDA neutrophil chemotaxis
GO:0031214 IEA biomineral tissue development
GO:0043066 NAS negative regulation of apoptotic process
GO:0045177 IDA apical part of cell
GO:0050840 IDA extracellular matrix binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237623 SPP1-002 protein_coding Homo_sapiens 8e-26 122
ENST00000395080 SPP1-001 protein_coding Homo_sapiens 0 243
ENST00000505146 SPP1-011 retained_intron Homo_sapiens 5e-25 117
ENST00000508002 SPP1-006 retained_intron Homo_sapiens 6.99949e-42 174
ENST00000509334 SPP1-009 processed_transcript Homo_sapiens 0.0000000000008 79
ENST00000509659 SPP1-004 processed_transcript Homo_sapiens 0 196
ENST00000513981 SPP1-008 processed_transcript Homo_sapiens 0 196
ENST00000614857 SPP1-201 protein_coding Homo_sapiens 0 235

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