C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing Tcp1, subunit 6a (zeta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031402 Cct6a-201 ENSMUSG00000029447 10090 + 5:129787439-129845820 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031402
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031402 31.977±9.47 14.605±2.95 34.000±0.00 52.576±21.20 18.878±3.80 16.311±2.18 14.561±2.72 24.244±8.06 21.901±11.25 14.414±2.92 30.094±3.15 34.133±26.52 106.001±55.66 28.081±12.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000645 CIL_000645_0002 CGP 5:129765558-129845820
CIL_0006MA CIL_0006MA_0002 CGP 5:129787439-129864050

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IDA acrosomal vesicle
GO:0002199 IDA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005832 IDA chaperonin-containing T-complex
GO:0005874 IEA microtubule
GO:0006457 IEA protein folding
GO:0007339 IDA binding of sperm to zona pellucida
GO:0044297 IDA cell body
GO:0044822 IEA poly(A) RNA binding
GO:0051082 IEA unfolded protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275603 CCT6A-001 protein_coding Homo_sapiens 0 1507
ENST00000335503 CCT6A-003 protein_coding Homo_sapiens 0 1103
ENST00000419314 CCT6P3-003 retained_intron Homo_sapiens 0 407
ENST00000426828 CCT6P3-004 processed_transcript Homo_sapiens 0 553
ENST00000434500 CCT6P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 291
ENST00000442266 CCT6P1-003 processed_transcript Homo_sapiens 0 542
ENST00000443108 CCT6P1-002 processed_transcript Homo_sapiens 0 542
ENST00000452026 CCT6P3-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1053
ENST00000462133 CCT6A-007 processed_transcript Homo_sapiens 0 298
ENST00000466572 CCT6A-006 retained_intron Homo_sapiens 0 193
ENST00000482776 CCT6A-010 retained_intron Homo_sapiens 0 597
ENST00000492618 CCT6A-005 retained_intron Homo_sapiens 0 302
ENST00000493855 CCT6A-004 retained_intron Homo_sapiens 0 246
ENST00000494736 CCT6A-008 retained_intron Homo_sapiens 0 292
ENST00000507234 CCT6P2-001 processed_pseudogene Homo_sapiens 0 1181
ENST00000525638 RP11-386B1.1-001 processed_pseudogene Homo_sapiens 0 405

Loading