C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GPN-loop GTPase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031420 Gpn3-001 ENSMUSG00000029464 10090 + 5:122372451-122382902 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000031420
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000031420 7.065±0.51 7.911±1.04 11.802±0.13 9.506±1.20 11.776±2.21 7.113±1.55 9.765±0.82 17.205±10.79 13.220±0.86 9.704±0.96 9.643±1.70 16.031±4.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YU CIL_0008YU_0002 VISTA 5:121792218-122394768
CIL_0004MV CIL_0004MV_0002 CGP 5:122371876-122406179

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005525 IEA GTP binding
GO:0008150 ND biological_process
GO:0043234 IEA protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228827 GPN3-001 protein_coding Homo_sapiens 0 885
ENST00000537466 GPN3-002 protein_coding Homo_sapiens 0 806
ENST00000543199 GPN3-201 protein_coding Homo_sapiens 0 809
ENST00000547323 GPN3-005 retained_intron Homo_sapiens 0 211
ENST00000549963 GPN3-011 protein_coding Homo_sapiens 4e-29 132
ENST00000550228 GPN3-004 protein_coding Homo_sapiens 0 381
ENST00000550974 GPN3-007 protein_coding Homo_sapiens 0 604

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