C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031613 Aimp2-001 ENSMUSG00000029610 10090 - 5:143902704-143909839 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031613
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031613 17.463±2.99 32.183±4.15 14.571±1.38 27.592±11.99 16.978±3.02 17.167±4.70 10.305±4.05 16.373±0.99 23.149±17.46 13.665±1.26 19.424±3.44 24.420±5.86 27.324±5.81 22.658±2.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BI CIL_0005BI_0002 CGP 5:143710325-143904256
CIL_0002VB CIL_0002VB_0002 CGP 5:143817788-143904256

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006412 IEA translation
GO:0006915 IEA apoptotic process
GO:0008285 IDA negative regulation of cell proliferation
GO:0016020 IEA membrane
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0060510 IMP Type II pneumocyte differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000199389 EIF2AK1-001 protein_coding Homo_sapiens 0 355
ENST00000223029 AIMP2-001 protein_coding Homo_sapiens 0 935
ENST00000395236 AIMP2-004 protein_coding Homo_sapiens 0 592
ENST00000400479 AIMP2-003 protein_coding Homo_sapiens 0 793
ENST00000415999 AIMP2-002 nonsense_mediated_decay Homo_sapiens 3e-32 143
ENST00000422786 EIF2AK1-011 protein_coding Homo_sapiens 0 355
ENST00000423834 STAG3L3-001 processed_transcript Homo_sapiens 1e-18 99
ENST00000425039 PMS2L2-001 unprocessed_pseudogene Homo_sapiens 3e-18 97
ENST00000506558 RP11-313P13.3-001 unprocessed_pseudogene Homo_sapiens 1e-18 99
ENST00000611766 STAG3L2-002 retained_intron Homo_sapiens 2e-20 104

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