C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506558 RP11-313P13.3-001 ENSG00000229018 9606 + 7:73005541-73021103 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverOvaryTestisENST00000506558
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Ovary Testis
ENST00000506558 0.374±0.00 0.844±0.00 1.095±0.00 0.454±0.00 0.339±0.00 0.163±0.00 0.720±0.00 0.555±0.00 1.435±0.09 0.449±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UT CIL_0005UT_0001 CGP 7:72959485-73308867

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110709 Pms2-014 protein_coding Mus_musculus 0 564
ENSMUST00000126331 Pms2-004 retained_intron Mus_musculus 0 564
ENSMUST00000141942 Pms2-007 retained_intron Mus_musculus 0 564
ENSMUST00000148011 Pms2-001 protein_coding Mus_musculus 0 564
ENSMUST00000110707 Pms2-005 processed_transcript Mus_musculus 0 553
ENSMUST00000110710 Pms2-002 processed_transcript Mus_musculus 0 553
ENSMUST00000170083 Pms2-003 processed_transcript Mus_musculus 0 553
ENSMUST00000147910 Pms2-009 processed_transcript Mus_musculus 0 418
ENSMUST00000154781 Pms2-006 retained_intron Mus_musculus 0 409
ENSMUST00000168085 Pms2-012 processed_transcript Mus_musculus 0 387
ENSMUST00000128207 Pms2-010 retained_intron Mus_musculus 0 263
ENSMUST00000149473 Aimp2-003 retained_intron Mus_musculus 1e-18 99
ENSMUST00000031613 Aimp2-001 protein_coding Mus_musculus 1e-18 99

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