C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aminoadipate-semialdehyde synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031707 Aass-001 ENSMUSG00000029695 10090 - 6:23072173-23132986 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031707
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031707 0.116±0.04 1.050±0.59 0.141±0.00 0.346±0.24 0.335±0.12 0.084±0.04 0.160±0.06 52.975±16.62 37.451±29.38 1.767±0.24 0.026±0.01 1.336±0.31 3.556±4.49 0.368±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R2 CIL_0003R2_0002 CGP 6:22875502-23132986
CIL_00083M CIL_00083M_0002 VISTA 6:22971299-23575344
CIL_0003QN CIL_0003QN_0002 CGP 6:23072173-23248264

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 TAS mitochondrion
GO:0006091 TAS generation of precursor metabolites and energy
GO:0019477 IDA L-lysine catabolic process
GO:0033512 IEA L-lysine catabolic process to acetyl-CoA via saccharopine
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0047130 IEA saccharopine dehydrogenase (NADP+, L-lysine-forming) activity
GO:0047131 IDA saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358954 AASS-006 nonsense_mediated_decay Homo_sapiens 0 2185
ENST00000393376 AASS-003 protein_coding Homo_sapiens 0 2826
ENST00000417368 AASS-001 protein_coding Homo_sapiens 0 2826
ENST00000426162 AASS-007 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000431170 AASS-005 nonsense_mediated_decay Homo_sapiens 0 2158
ENST00000460376 AASS-004 retained_intron Homo_sapiens 0 486
ENST00000473553 AASS-002 processed_transcript Homo_sapiens 0 1199

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