C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 3, subfamily a, polypeptide 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031741 Cyp3a13-001 ENSMUSG00000029727 10090 - 5:137892932-137921619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000031741
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000031741 0.018±0.00 0.070±0.03 0.175±0.00 0.047±0.06 0.071±0.03 6.617±1.18 0.106±0.00 0.153±0.03 14.106±10.09 0.574±0.09 0.031±0.01 0.073±0.04 0.325±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 ISS monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0010628 IMP positive regulation of gene expression
GO:0016020 IEA membrane
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process
GO:0070330 IEA aromatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222382 CYP3A43-014 protein_coding Homo_sapiens 0 965
ENST00000222982 CYP3A5-001 protein_coding Homo_sapiens 0 1166
ENST00000336374 CYP3A7-001 protein_coding Homo_sapiens 0 1155
ENST00000336411 CYP3A4-001 protein_coding Homo_sapiens 0 1277
ENST00000339843 CYP3A5-201 protein_coding Homo_sapiens 0 595
ENST00000342499 CYP3A43-201 protein_coding Homo_sapiens 0 664
ENST00000354593 CYP3A4-201 protein_coding Homo_sapiens 0 821
ENST00000354829 CYP3A43-001 protein_coding Homo_sapiens 0 981
ENST00000415413 CYP3A43-006 protein_coding Homo_sapiens 0 484
ENST00000417625 CYP3A43-003 protein_coding Homo_sapiens 0 562
ENST00000434806 CYP3A43-012 nonsense_mediated_decay Homo_sapiens 0 562
ENST00000461920 CYP3A5-008 retained_intron Homo_sapiens 0 1046
ENST00000463364 CYP3A5-009 retained_intron Homo_sapiens 0 370
ENST00000466061 CYP3A5-006 retained_intron Homo_sapiens 0 379
ENST00000469887 CYP3A5-002 retained_intron Homo_sapiens 0 595
ENST00000477357 CYP3A7-002 retained_intron Homo_sapiens 0 1033
ENST00000481362 CYP3A43-011 retained_intron Homo_sapiens 0 484
ENST00000481825 CYP3A5-005 retained_intron Homo_sapiens 0 457
ENST00000491648 CYP3A43-010 processed_transcript Homo_sapiens 0 562
ENST00000498080 CYP3A7-004 retained_intron Homo_sapiens 1e-39 167
ENST00000611620 CYP3A7-201 protein_coding Homo_sapiens 0 1146
ENST00000620220 CYP3A7-202 protein_coding Homo_sapiens 0 1171

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