C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 3, subfamily A, polypeptide 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354593 CYP3A4-201 ENSG00000160868 9606 - 7:99756960-99784188 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000354593
Transcript ID Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000354593 0.043±0.00 0.010±0.00 0.032±0.00 0.056±0.04 35.932±35.82 38.863±0.00 0.016±0.00 0.029±0.02 0.024±0.00 0.064±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LC CIL_0005LC_0006 CGP 7:99684679-99784265
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0005LC CIL_0005LC_0005 CGP 7:99756960-99866102

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031741 Cyp3a13-001 protein_coding Mus_musculus 0 821
ENSMUST00000031633 Cyp3a16-001 protein_coding Mus_musculus 0 712
ENSMUST00000067479 Cyp3a44-001 protein_coding Mus_musculus 0 664
ENSMUST00000035571 Cyp3a59-201 protein_coding Mus_musculus 0 597
ENSMUST00000145062 Cyp3a25-002 nonsense_mediated_decay Mus_musculus 0 592
ENSMUST00000068317 Cyp3a25-001 protein_coding Mus_musculus 0 592
ENSMUST00000079268 Cyp3a57-001 protein_coding Mus_musculus 0 525
ENSMUST00000174696 Cyp3a57-002 nonsense_mediated_decay Mus_musculus 0 525
ENSMUST00000153808 Cyp3a25-004 processed_transcript Mus_musculus 0 237

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