C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily V, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031901 Trpv5-201 ENSMUSG00000036899 10090 - 6:41652770-41680723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryPlacentaTestisENSMUST00000031901
Transcript ID Kidney Liver Ovary Placenta Testis
ENSMUST00000031901 3.809±1.54 0.142±0.11 0.056±0.00 0.121±0.12 0.051±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VI CIL_0006VI_0002 CGP 6:41620621-41680723
CIL_0006VJ CIL_0006VJ_0002 CGP 6:41652770-41685717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005262 IDA calcium channel activity
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005887 ISS integral component of plasma membrane
GO:0006816 IDA calcium ion transport
GO:0006874 NAS cellular calcium ion homeostasis
GO:0016324 IDA apical plasma membrane
GO:0051262 IDA protein tetramerization
GO:0060402 IEA calcium ion transport into cytosol
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265310 TRPV5-001 protein_coding Homo_sapiens 0 1814
ENST00000359396 TRPV6-001 protein_coding Homo_sapiens 0 1315
ENST00000436401 TRPV6-006 protein_coding Homo_sapiens 0 322
ENST00000439304 TRPV5-003 protein_coding Homo_sapiens 0 1101
ENST00000442623 TRPV5-002 protein_coding Homo_sapiens 0 876
ENST00000463646 TRPV6-201 protein_coding Homo_sapiens 0 1273
ENST00000474388 TRPV6-009 retained_intron Homo_sapiens 0 246
ENST00000485138 TRPV6-004 retained_intron Homo_sapiens 0 604
ENST00000611485 TRPV6-202 protein_coding Homo_sapiens 0 1327
ENST00000615386 TRPV6-005 retained_intron Homo_sapiens 0 1273
ENST00000619250 TRPV6-003 retained_intron Homo_sapiens 0 220
ENST00000621710 TRPV5-201 protein_coding Homo_sapiens 0 1814

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