C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily V, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359396 TRPV6-001 ENSG00000165125 9606 - 7:142871203-142885762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLiverLungOvaryPlacentaENST00000359396
Transcript ID Bladder Breast Kidney Liver Lung Ovary Placenta
ENST00000359396 0.080±0.00 0.209±0.00 2.347±0.00 0.109±0.00 0.099±0.09 0.059±0.00 11.640±2.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039T CIL_00039T_0001 CGP 7:142855061-142885762
CIL_0006VI CIL_0006VI_0001 CGP 7:142871203-142933808

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005262 IDA calcium channel activity
GO:0005515 IPI:IEA protein binding
GO:0005516 IDA calmodulin binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0006816 NAS calcium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0017158 NAS regulation of calcium ion-dependent exocytosis
GO:0034220 TAS ion transmembrane transport
GO:0055085 TAS:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0070588 TAS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031902 Trpv6-201 protein_coding Mus_musculus 0 2479
ENSMUST00000031901 Trpv5-201 protein_coding Mus_musculus 0 1315

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