C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily V, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265310 TRPV5-001 ENSG00000127412 9606 - 7:142908101-142933808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainKidneyOvaryTestisENST00000265310
Transcript ID Adrenal Bladder Brain Kidney Ovary Testis
ENST00000265310 0.079±0.00 0.152±0.00 0.105±0.02 0.864±0.00 0.007±0.00 0.036±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VI CIL_0006VI_0001 CGP 7:142871203-142933808
CIL_0006VJ CIL_0006VJ_0001 CGP 7:142908101-142940868

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005262 ISS calcium channel activity
GO:0005515 IPI:IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0006816 ISS calcium ion transport
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0034220 TAS ion transmembrane transport
GO:0051262 ISS protein tetramerization
GO:0055085 TAS transmembrane transport
GO:0060402 IEA calcium ion transport into cytosol
GO:0070588 TAS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031901 Trpv5-201 protein_coding Mus_musculus 0 1814
ENSMUST00000031902 Trpv6-201 protein_coding Mus_musculus 0 1522

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