C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4E member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032151 Eif4e3-001 ENSMUSG00000093661 10090 - 6:99625135-99666771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032151
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032151 27.302±8.53 18.454±0.00 26.705±2.18 10.165±0.19 21.135±1.39 17.135±1.70 6.896±1.42 2.832±0.85 21.852±0.58 12.510±1.05 13.380±4.58 6.950±1.96 0.808±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008X1 CIL_0008X1_0002 VISTA 6:99046432-99648661
CIL_0008ML CIL_0008ML_0002 VISTA 6:99094912-99696384
CIL_0008XU CIL_0008XU_0002 VISTA 6:99103919-99705378
CIL_0008EM CIL_0008EM_0002 VISTA 6:99166876-99767819
CIL_0007YY CIL_0007YY_0002 VISTA 6:99183861-99786227
CIL_00088J CIL_00088J_0002 VISTA 6:99586863-100189372
CIL_0003B1 CIL_0003B1_0002 CGP 6:99625135-99693818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003743 IEA translation initiation factor activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005845 ISS mRNA cap binding complex
GO:0006413 IEA translational initiation
GO:0006417 IEA regulation of translation
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013768 eif4e3-001 protein_coding Danio_rerio 0 298
ENSDART00000140745 eif4e3-002 protein_coding Danio_rerio 0 268
ENST00000295612 EIF4E3-002 protein_coding Homo_sapiens 0 937
ENST00000389826 EIF4E3-201 protein_coding Homo_sapiens 0 937
ENST00000421769 EIF4E3-004 protein_coding Homo_sapiens 0 641
ENST00000425534 EIF4E3-001 protein_coding Homo_sapiens 0 1022
ENST00000448225 EIF4E3-202 protein_coding Homo_sapiens 0 937
ENST00000468147 EIF4E3-010 processed_transcript Homo_sapiens 0 425
ENST00000469524 EIF4E3-008 protein_coding Homo_sapiens 0 387
ENST00000481525 EIF4E3-009 processed_transcript Homo_sapiens 0 316
ENST00000496214 EIF4E3-005 protein_coding Homo_sapiens 0 422
ENST00000497838 EIF4E3-007 protein_coding Homo_sapiens 0 508

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