C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4E family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389826 EIF4E3-201 ENSG00000163412 9606 - 3:71679291-71729118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000389826
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000389826 3.432±0.00 2.634±0.00 0.568±0.00 2.154±0.00 1.936±0.00 2.527±0.00 1.194±0.00 0.197±0.00 1.999±0.00 2.564±0.00 0.970±0.00 1.074±1.12 1.022±0.06 0.609±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008X1 CIL_0008X1_0001 VISTA 3:71097676-71699658
CIL_0008ML CIL_0008ML_0001 VISTA 3:71150326-71751819
CIL_0008XU CIL_0008XU_0001 VISTA 3:71158318-71759723
CIL_0008EM CIL_0008EM_0001 VISTA 3:71224456-71825389
CIL_0007YY CIL_0007YY_0001 VISTA 3:71241746-71843635
CIL_00088J CIL_00088J_0001 VISTA 3:71639690-72241632
CIL_0003B1 CIL_0003B1_0001 CGP 3:71675416-71756496

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003743 IEA translation initiation factor activity
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005845 ISS mRNA cap binding complex
GO:0006413 IEA translational initiation
GO:0006417 IEA regulation of translation
GO:0019221 TAS cytokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032151 Eif4e3-001 protein_coding Mus_musculus 0 937

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