C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter, taurine), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032185 Slc6a6-201 ENSMUSG00000030096 10090 + 6:91684067-91759063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032185
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032185 21.766±6.00 102.806±21.84 19.385±3.28 18.676±4.03 21.077±3.76 24.895±3.30 6.878±6.28 64.382±5.61 11.820±7.83 46.198±4.17 18.183±2.00 39.224±7.03 24.825±16.51 6.001±2.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GZ CIL_0007GZ_0002 CGP 6:91515928-91759063
CIL_000514 CIL_000514_0002 CGP 6:91684067-91827250

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005368 IDA taurine transmembrane transporter activity
GO:0005369 IEA taurine:sodium symporter activity
GO:0005887 IC integral component of plasma membrane
GO:0006836 IEA neurotransmitter transport
GO:0015734 IMP taurine transport
GO:0015849 IEA organic acid transport
GO:0030977 IEA taurine binding
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000064082 slc6a6b-201 protein_coding Danio_rerio 0 1029
ENST00000413933 SLC6A6P1-001 processed_pseudogene Homo_sapiens 0 1537
ENST00000452775 SLC6A6-009 protein_coding Homo_sapiens 0 470
ENST00000610642 SLC6A6-002 nonsense_mediated_decay Homo_sapiens 0 1221
ENST00000613060 SLC6A6-001 protein_coding Homo_sapiens 0 2835
ENST00000613930 SLC6A6-003 retained_intron Homo_sapiens 6e-25 119
ENST00000615188 SLC6A6-007 processed_transcript Homo_sapiens 0 545
ENST00000618278 SLC6A6-006 nonsense_mediated_decay Homo_sapiens 0 1406
ENST00000621751 SLC6A6-004 protein_coding Homo_sapiens 0 811
ENST00000622176 SLC6A6-005 nonsense_mediated_decay Homo_sapiens 0 595
ENST00000622186 SLC6A6-201 protein_coding Homo_sapiens 0 2850
ENST00000622810 SLC6A6-008 processed_transcript Homo_sapiens 0 191

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