C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tissue inhibitor of metalloproteinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032462 Timp4-201 ENSMUSG00000030317 10090 - 6:115245616-115251849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032462
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032462 107.173±94.19 14.887±5.16 0.707±0.03 3.713±1.43 26.252±3.96 5.014±0.86 17.497±5.14 1.513±0.28 0.048±0.03 3.366±0.84 13.507±3.74 24.319±11.00 0.285±0.25 0.759±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SM CIL_0005SM_0002 CGP 6:115004381-115282626
CIL_0001ZK CIL_0001ZK_0002 CGP 6:115245616-115490401

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0007417 IEA central nervous system development
GO:0008191 IEA metalloendopeptidase inhibitor activity
GO:0009725 IEA response to hormone
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0030017 IEA sarcomere
GO:0032496 IEA response to lipopolysaccharide
GO:0034097 IEA response to cytokine
GO:0042493 IEA response to drug
GO:0042698 IEA ovulation cycle
GO:0043434 IEA response to peptide hormone
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287814 TIMP4-001 protein_coding Homo_sapiens 0 863

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