C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001ZK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157150-ENSG00000132170 CGP 9606 3:12153051-12434356
GeneTranscriptPositionBiotype
ENSG00000132170 (PPARG)
peroxisome proliferator-activated receptor gamma 		ENST00000287820 (PPARG-002) 12351472-12434356 protein_coding
ENST00000309576 (PPARG-007) 12287860-12434344 protein_coding
ENST00000396999 (PPARG-014) 12379706-12417154 nonsense_mediated_decay
ENST00000397000 (PPARG-009) 12312388-12434216 protein_coding
ENST00000397010 (PPARG-003) 12287368-12434344 protein_coding
ENST00000397012 (PPARG-001) 12288838-12434344 protein_coding
ENST00000397015 (PPARG-013) 12287901-12434311 protein_coding
ENST00000397023 (PPARG-011) 12351569-12434344 nonsense_mediated_decay
ENST00000397026 (PPARG-005) 12289071-12434339 protein_coding
ENST00000397029 (PPARG-015) 12287388-12381491 protein_coding
ENST00000438682 (PPARG-017) 12305773-12381392 protein_coding
ENST00000455517 (PPARG-004) 12288838-12379834 protein_coding
ENST00000477039 (PPARG-012) 12351472-12406846 retained_intron
ENST00000497594 (PPARG-008) 12289111-12406846 retained_intron
ENSG00000157150 (TIMP4)
TIMP metallopeptidase inhibitor 4 		ENST00000287814 (TIMP4-001) 12153051-12159351 protein_coding
ENSG00000225026 (AC091492.2)
 ENST00000419844 (AC091492.2-001) 12328003-12328274 processed_pseudogene
ENSG00000233026 (AC026166.2)
MT-CO1 pseudogene 5 		ENST00000433573 (AC026166.2-001) 12165299-12165642 processed_pseudogene
ENSG00000236062 (GSTM5P1)
glutathione S-transferase mu 5 pseudogene 1 		ENST00000434751 (GSTM5P1-001) 12257801-12258460 processed_pseudogene
CIL_0001ZK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030317-ENSMUSG00000000440 CGP 10090 6:115245616-115490401
GeneTranscriptPositionBiotype
ENSMUSG00000000440 (Pparg)
peroxisome proliferator activated receptor gamma 		ENSMUST00000000450 (Pparg-201) 115422066-115490401 protein_coding
ENSMUST00000171644 (Pparg-202) 115361221-115490401 protein_coding
ENSMUSG00000009394 (Syn2)
synapsin II 		ENSMUST00000009538 (Syn2-201) 115134902-115282626 protein_coding
ENSMUST00000169345 (Syn2-202) 115134902-115276559 protein_coding
ENSMUSG00000030317 (Timp4)
tissue inhibitor of metalloproteinase 4 		ENSMUST00000032462 (Timp4-201) 115245616-115251849 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZK_0001ENSG00000132170ENST00000287820ENST00000309576ENST00000396999ENST00000397000ENST00000397010ENST00000397012ENST00000397015ENST00000397023ENST00000397026ENST00000397029ENST00000438682ENST00000455517ENST00000477039ENST00000497594ENSG00000157150ENST00000287814ENSG00000225026ENST00000419844ENSG00000233026ENST00000433573ENSG00000236062ENST00000434751CIL_0001ZK_0002ENSMUSG00000000440ENSMUST00000000450ENSMUST00000171644ENSMUSG00000009394ENSMUST00000009538ENSMUST00000169345ENSMUSG00000030317ENSMUST00000032462
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZK_0001ENSG00000132170ENST00000287820ENST00000309576ENST00000397000ENST00000397010ENST00000397012ENST00000397015ENST00000397023ENST00000497594ENSG00000157150ENST00000287814ENSG00000225026ENST00000419844ENSG00000233026ENST00000433573ENSG00000236062ENST00000434751CIL_0001ZK_0002ENSMUSG00000000440ENSMUST00000000450ENSMUST00000171644ENSMUSG00000009394ENSMUST00000009538ENSMUST00000169345ENSMUSG00000030317ENSMUST00000032462
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132170 ENST00000287820 N/A N/A N/A N/A 8.216±0.00 N/A N/A N/A N/A 3.536±1.77 N/A N/A N/A N/A
ENST00000309576 26.414±0.00 6.968±0.00 N/A N/A 18.479±0.00 7.252±0.00 2.362±0.00 3.967±0.00 1.156±0.00 N/A N/A 4.939±0.00 5.707±0.89 3.971±0.00
ENST00000396999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397000 N/A N/A N/A N/A N/A N/A 2.388±0.00 3.086±0.00 N/A N/A N/A N/A N/A 1.047±0.00
ENST00000397010 N/A N/A 1.211±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397012 N/A N/A N/A N/A N/A 3.488±0.00 N/A N/A N/A 1.700±0.00 N/A 2.186±0.00 4.335±0.09 N/A
ENST00000397015 24.714±0.00 4.264±0.00 3.373±0.00 1.176±0.29 22.943±13.01 4.973±0.00 4.490±0.00 4.772±0.00 5.565±4.30 6.400±0.00 0.966±0.29 6.108±4.60 20.593±2.17 1.955±0.37
ENST00000397023 N/A N/A N/A N/A N/A N/A 0.572±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000397026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497594 N/A N/A N/A 0.218±0.00 N/A 4.210±0.00 N/A N/A N/A 1.747±0.37 N/A 1.774±0.00 N/A N/A
ENSG00000157150 ENST00000287814 78.209±0.00 4.710±0.00 0.568±0.00 N/A 40.458±33.41 8.152±5.56 11.228±0.00 1.113±1.06 2.978±2.52 0.670±0.08 5.295±0.81 1.211±0.57 7.415±4.66 1.791±0.00
ENSG00000225026 ENST00000419844 N/A N/A N/A N/A 5.563±5.52 4.120±4.00 0.308±0.27 0.391±0.00 18.362±0.00 4.654±0.00 N/A 0.710±0.41 2.004±0.00 0.394±0.00
ENSG00000233026 ENST00000433573 0.030±0.00 N/A N/A 0.399±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.01
ENSG00000236062 ENST00000434751 N/A N/A N/A 0.131±0.00 N/A N/A N/A 0.174±0.00 N/A N/A 0.021±0.00 N/A N/A 0.110±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000440 ENSMUST00000000450 99.169±43.34 20.220±5.88 9.679±2.80 N/A 84.514±4.37 10.073±2.30 3.651±1.48 5.713±0.58 0.581±0.13 7.790±0.96 0.497±0.17 18.623±5.66 4.726±0.00 0.300±0.10
ENSMUST00000171644 N/A N/A 18.459±1.67 0.183±0.15 N/A 6.444±2.33 1.637±0.69 0.946±0.15 1.844±1.37 1.346±0.21 0.611±0.33 6.070±4.71 59.644±23.47 0.570±0.34
ENSMUSG00000009394 ENSMUST00000009538 1.376±0.09 3.805±1.59 1.192±0.05 7.130±5.06 4.195±1.07 1.672±0.64 0.459±0.07 1.876±0.23 0.018±0.01 1.813±0.31 N/A 1.788±0.85 0.136±0.16 1.198±0.30
ENSMUST00000169345 2.344±0.08 5.408±2.59 5.987±1.00 24.907±16.61 3.974±1.09 1.926±0.93 1.429±0.22 2.367±0.28 0.030±0.02 3.819±0.38 0.237±0.00 1.986±1.28 0.077±0.05 1.275±0.49
ENSMUSG00000030317 ENSMUST00000032462 107.173±94.19 14.887±5.16 0.707±0.03 3.713±1.43 26.252±3.96 5.014±0.86 17.497±5.14 1.513±0.28 0.048±0.03 3.366±0.84 13.507±3.74 24.319±11.00 0.285±0.25 0.759±0.59

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