C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032710 Slc17a6-201 ENSMUSG00000030500 10090 + 7:51621830-51671125 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonLiverOvaryPlacentaTestisENSMUST00000032710
Transcript ID Adipose Adrenal Bladder Brain Colon Liver Ovary Placenta Testis
ENSMUST00000032710 0.009±0.00 0.051±0.01 0.003±0.00 12.926±3.91 0.024±0.00 0.003±0.00 0.004±0.00 0.010±0.01 0.294±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FV CIL_0003FV_0002 CGP 7:51511029-51671125
CIL_0003FU CIL_0003FU_0002 CGP 7:51621830-51862267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001504 IDA neurotransmitter uptake
GO:0005313 IDA L-glutamate transmembrane transporter activity
GO:0006814 IEA sodium ion transport
GO:0008021 IDA synaptic vesicle
GO:0015293 IEA symporter activity
GO:0015813 IDA L-glutamate transport
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0043005 IEA neuron projection
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000099872 slc17a6b-202 protein_coding Danio_rerio 0 935
ENSDART00000147554 slc17a6b-001 protein_coding Danio_rerio 0 760
ENST00000263160 SLC17A6-001 protein_coding Homo_sapiens 0 2549
ENST00000534115 SLC17A6-002 retained_intron Homo_sapiens 0 346

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