C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 17 (vesicular glutamate transporter), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263160 SLC17A6-001 ENSG00000091664 9606 + 11:22338097-22379503 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000263160
Transcript ID Brain Testis
ENST00000263160 3.906±0.51 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FV CIL_0003FV_0001 CGP 11:22193176-22379503
CIL_0003FU CIL_0003FU_0001 CGP 11:22338097-22626787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001504 IEA neurotransmitter uptake
GO:0005313 IEA L-glutamate transmembrane transporter activity
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0008021 IEA synaptic vesicle
GO:0015293 IEA symporter activity
GO:0015813 IEA L-glutamate transport
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030672 TAS synaptic vesicle membrane
GO:0043005 IEA neuron projection
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032710 Slc17a6-201 protein_coding Mus_musculus 0 2549

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