C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase long-chain family member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033634 Acsl4-001 ENSMUSG00000031278 10090 - X:142317993-142390535 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000033634
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000033634 1.430±0.62 57.692±14.64 1.524±0.15 2.813±0.38 1.481±0.67 0.832±0.18 0.469±0.08 0.814±0.12 0.857±0.14 3.185±0.57 6.174±4.70 0.847±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068B CIL_00068B_0002 CGP X:142304752-142390535
CIL_00079Z CIL_00079Z_0002 CGP X:142317993-142843494

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001676 IEA long-chain fatty acid metabolic process
GO:0004467 ISA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005777 IEA peroxisome
GO:0005783 IEA endoplasmic reticulum
GO:0005811 IEA lipid particle
GO:0006629 IEA lipid metabolic process
GO:0006641 IEA triglyceride metabolic process
GO:0007584 IEA response to nutrient
GO:0008610 IEA lipid biosynthetic process
GO:0015908 IEA fatty acid transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019217 TAS regulation of fatty acid metabolic process
GO:0030182 IMP neuron differentiation
GO:0030307 IEA positive regulation of cell growth
GO:0031957 IEA very long-chain fatty acid-CoA ligase activity
GO:0031966 IEA mitochondrial membrane
GO:0032307 IEA negative regulation of prostaglandin secretion
GO:0043025 IEA neuronal cell body
GO:0044233 IEA ER-mitochondrion membrane contact site
GO:0047676 IEA arachidonate-CoA ligase activity
GO:0060136 IMP embryonic process involved in female pregnancy
GO:0060996 IEA dendritic spine development
GO:0070062 IEA extracellular vesicular exosome
GO:0070672 IEA response to interleukin-15

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000006489 acsl4a-001 protein_coding Danio_rerio 0 571
ENST00000340800 ACSL4-201 protein_coding Homo_sapiens 0 3653
ENST00000348502 ACSL4-001 protein_coding Homo_sapiens 0 3249
ENST00000469796 ACSL4-003 protein_coding Homo_sapiens 0 3666
ENST00000469857 ACSL4-002 protein_coding Homo_sapiens 0 494
ENST00000502391 ACSL4-007 protein_coding Homo_sapiens 0 920
ENST00000504980 ACSL4-009 protein_coding Homo_sapiens 0 708
ENST00000505075 ACSL4-011 processed_transcript Homo_sapiens 0 252
ENST00000505855 ACSL4-008 protein_coding Homo_sapiens 0 749
ENST00000508092 ACSL4-006 protein_coding Homo_sapiens 0 715
ENST00000514500 ACSL4-010 nonsense_mediated_decay Homo_sapiens 0 580

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