C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: male-specific lethal 3 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033725 Msl3-001 ENSMUSG00000031358 10090 - X:168654117-168673898 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartMuscleOvaryPlacentaTestisENSMUST00000033725
Transcript ID Adrenal Heart Muscle Ovary Placenta Testis
ENSMUST00000033725 2.433±0.75 2.896±0.37 4.204±1.02 1.723±0.00 3.172±0.86 0.690±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISS DNA binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035064 ISS methylated histone binding
GO:0043984 ISS histone H4-K16 acetylation
GO:0072487 ISS MSL complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312196 MSL3-009 protein_coding Homo_sapiens 0 1893
ENST00000337339 MSL3-001 protein_coding Homo_sapiens 0 1277
ENST00000361672 MSL3-201 protein_coding Homo_sapiens 0 1376
ENST00000380692 MSL3-004 protein_coding Homo_sapiens 0 963
ENST00000380693 MSL3-010 protein_coding Homo_sapiens 0 1622
ENST00000398527 MSL3-202 protein_coding Homo_sapiens 0 1622
ENST00000421368 MSL3-003 protein_coding Homo_sapiens 0 553
ENST00000444413 AP004289.2-001 processed_pseudogene Homo_sapiens 0 896
ENST00000468149 MSL3-012 nonsense_mediated_decay Homo_sapiens 0 1376
ENST00000482871 MSL3-015 retained_intron Homo_sapiens 0 375
ENST00000483645 MSL3-016 processed_transcript Homo_sapiens 0 302
ENST00000489759 RP11-365F18.3-001 processed_pseudogene Homo_sapiens 0 472
ENST00000494268 MSL3-011 retained_intron Homo_sapiens 0 638

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