C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deleted in liver cancer 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033923 Dlc1-002 ENSMUSG00000031523 10090 - 8:36567751-36613943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033923
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033923 23.719±10.16 12.546±2.56 6.493±1.40 2.453±0.51 13.077±2.70 2.884±0.65 11.580±0.94 7.119±0.68 3.445±1.07 35.983±3.04 2.416±0.21 10.123±2.57 11.206±10.27 0.357±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VG CIL_0003VG_0002 CGP 8:36457548-36953143
CIL_000274 CIL_000274_0002 CGP 8:36567751-36995531

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0003007 IMP heart morphogenesis
GO:0007165 IEA signal transduction
GO:0008289 IEA lipid binding
GO:0021575 IMP hindbrain morphogenesis
GO:0030036 IMP actin cytoskeleton organization
GO:0030900 IMP forebrain development
GO:0048041 IMP focal adhesion assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276297 DLC1-001 protein_coding Homo_sapiens 0 3567
ENST00000358919 DLC1-002 protein_coding Homo_sapiens 0 3672
ENST00000498524 ANKRD28-006 retained_intron Homo_sapiens 0.00008 55
ENST00000510250 DLC1-017 retained_intron Homo_sapiens 0 1940
ENST00000510318 DLC1-006 processed_transcript Homo_sapiens 0 1646
ENST00000512044 DLC1-005 protein_coding Homo_sapiens 0 3567
ENST00000513347 ATP5G1-002 retained_intron Homo_sapiens 0.0001 53
ENST00000513883 DLC1-007 processed_transcript Homo_sapiens 0 348
ENST00000515225 DLC1-012 processed_transcript Homo_sapiens 0 274
ENST00000520226 DLC1-008 protein_coding Homo_sapiens 0 3567

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