C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513347 ATP5G1-002 ENSG00000159199 9606 + 17:48892767-48895868 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonOvaryTestisENST00000513347
Transcript ID Bladder Breast Colon Ovary Testis
ENST00000513347 0.155±0.00 0.115±0.00 0.397±0.00 0.227±0.00 0.321±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178611 Atp5g1-201 protein_coding Mus_musculus 0 455
ENSMUST00000107684 Atp5g1-002 protein_coding Mus_musculus 0 455
ENSMUST00000107686 Atp5g1-003 protein_coding Mus_musculus 0 455
ENSMUST00000090541 Atp5g1-001 protein_coding Mus_musculus 0 455
ENSMUST00000081241 Gm10039-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000119634 Gm12337-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000131499 Gm4660-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000170777 Gm6612-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000178807 Gm4479-201 processed_pseudogene Mus_musculus 0 217
ENSMUST00000117586 Gm14299-001 processed_pseudogene Mus_musculus 0 207
ENSMUST00000117052 Gm14050-001 processed_pseudogene Mus_musculus 7e-23 113
ENSMUST00000098826 Dlc1-001 protein_coding Mus_musculus 0.0001 53
ENSMUST00000033923 Dlc1-002 protein_coding Mus_musculus 0.0001 53

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