C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exoribonuclease 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033927 Eri1-201 ENSMUSG00000031527 10090 - 8:35465265-35495533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033927
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033927 2.251±1.19 1.196±0.52 2.195±0.08 2.093±1.42 2.049±0.39 2.469±0.78 1.021±0.04 1.536±0.21 3.558±3.06 3.088±0.31 0.957±0.07 3.157±0.86 4.712±2.52 1.108±0.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0008408 ISS 3'-5' exonuclease activity
GO:0019843 IDA rRNA binding
GO:0031047 IEA gene silencing by RNA
GO:0031125 IDA rRNA 3'-end processing
GO:0043022 IDA ribosome binding
GO:0046872 IEA metal ion binding
GO:0071204 IDA histone pre-mRNA 3'end processing complex
GO:0071207 IDA histone pre-mRNA stem-loop binding
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250263 ERI1-201 protein_coding Homo_sapiens 0 1000
ENST00000519292 ERI1-005 protein_coding Homo_sapiens 0 935
ENST00000520684 ERI1-003 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000523898 ERI1-001 protein_coding Homo_sapiens 0 1000

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