C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NIMA (never in mitosis gene a)-related expressed kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034065 Nek1-001 ENSMUSG00000031644 10090 + 8:60993195-61131346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034065
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034065 0.740±0.36 2.423±0.74 3.999±1.52 0.460±0.26 0.574±0.19 0.498±0.17 0.509±0.30 1.379±0.95 1.117±0.26 0.583±0.16 2.530±1.97 1.517±0.57 5.731±2.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KO CIL_0006KO_0002 CGP 8:60993195-61396072

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000242 IEA pericentriolar material
GO:0004672 ISA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISA nucleus
GO:0005737 ISA cytoplasm
GO:0005813 IDA centrosome
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007067 IEA mitotic nuclear division
GO:0010212 IMP response to ionizing radiation
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0042384 IEA cilium assembly
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000439128 NEK1-001 protein_coding Homo_sapiens 0 2061
ENST00000505119 NEK1-008 protein_coding Homo_sapiens 0 435
ENST00000507142 NEK1-004 protein_coding Homo_sapiens 0 1947
ENST00000509912 NEK1-007 retained_intron Homo_sapiens 0 1391
ENST00000510108 NEK1-006 nonsense_mediated_decay Homo_sapiens 0 830
ENST00000510533 NEK1-002 protein_coding Homo_sapiens 0 3884
ENST00000511633 NEK1-003 protein_coding Homo_sapiens 0 1947
ENST00000512193 NEK1-005 protein_coding Homo_sapiens 0 2220

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