C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: origin recognition complex, subunit 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034132 Orc6-201 ENSMUSG00000031697 10090 + 8:85299632-85308278 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034132
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034132 5.642±1.39 2.207±0.32 7.753±1.44 10.704±4.84 3.921±0.61 2.419±1.13 1.230±0.53 2.978±0.47 17.809±19.23 4.746±0.61 1.353±0.30 5.924±1.52 27.001±11.30 5.240±1.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VM CIL_0002VM_0002 CGP 8:85260397-85308278
CIL_00044W CIL_00044W_0003 CGP 8:85299632-85386345

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000808 IEA origin recognition complex
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005664 IEA nuclear origin of replication recognition complex
GO:0006261 IMP DNA-dependent DNA replication
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219097 ORC6-001 protein_coding Homo_sapiens 0 544
ENST00000563306 ORC6-003 retained_intron Homo_sapiens 0 477
ENST00000563599 ORC6-004 nonsense_mediated_decay Homo_sapiens 0 466
ENST00000566860 ORC6-005 protein_coding Homo_sapiens 0 510
ENST00000567000 ORC6-007 retained_intron Homo_sapiens 8e-31 139
ENST00000568364 ORC6-006 protein_coding Homo_sapiens 0 414
ENST00000569239 ORC6-002 retained_intron Homo_sapiens 0 414
ENST00000570260 ORC6-008 processed_transcript Homo_sapiens 0 412
ENST00000575571 ORC6-009 processed_transcript Homo_sapiens 4e-31 139

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