C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin alpha FG-GAP repeat containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034140 Itfg1-201 ENSMUSG00000031703 10090 - 8:85717557-85840949 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034140
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034140 19.430±1.05 49.049±2.30 18.020±0.69 24.985±3.38 14.756±6.86 25.278±1.07 8.148±0.68 27.524±4.00 11.511±2.30 16.502±2.26 14.478±1.50 23.521±6.20 15.991±5.10 14.084±4.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VK CIL_0002VK_0002 CGP 8:85636588-85840949
CIL_0002VL CIL_0002VL_0002 CGP 8:85717557-86061376

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320640 ITFG1-001 protein_coding Homo_sapiens 0 2202
ENST00000537184 ITFG1-011 processed_transcript Homo_sapiens 0 1206
ENST00000542691 ITFG1-006 processed_transcript Homo_sapiens 0 1351
ENST00000544001 ITFG1-002 protein_coding Homo_sapiens 0 1664
ENST00000563350 ITFG1-005 processed_transcript Homo_sapiens 0 527
ENST00000563730 ITFG1-012 protein_coding Homo_sapiens 0 412
ENST00000565262 ITFG1-010 protein_coding Homo_sapiens 0 291
ENST00000565940 ITFG1-003 protein_coding Homo_sapiens 0 351
ENST00000567957 ITFG1-009 retained_intron Homo_sapiens 0 621
ENST00000568047 ITFG1-004 processed_transcript Homo_sapiens 0 1212
ENST00000569551 ITFG1-007 retained_intron Homo_sapiens 0 398

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