C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 38A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034244 Tmem38a-201 ENSMUSG00000031791 10090 + 8:72572103-72587282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034244
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034244 6.026±2.77 1.567±0.37 30.935±0.96 14.952±7.64 42.199±46.85 4.349±0.88 193.652±8.99 9.694±3.20 1.085±0.23 18.046±8.23 548.773±16.77 8.817±2.95 1.893±0.88 0.816±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G1 CIL_0006G1_0002 CGP 8:72572103-72714746

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0015269 TAS calcium-activated potassium channel activity
GO:0016021 IEA integral component of membrane
GO:0016529 IEA sarcoplasmic reticulum
GO:0070062 IEA extracellular vesicular exosome
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000187762 TMEM38A-001 protein_coding Homo_sapiens 0 989
ENST00000595452 TMEM38A-002 retained_intron Homo_sapiens 0 542
ENST00000599479 TMEM38A-003 protein_coding Homo_sapiens 0 399

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