C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: multivesicular body subunit 12A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034272 Mvb12a-201 ENSMUSG00000031813 10090 + 8:71542930-71548024 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034272 38.328±12.14 71.088±8.76 42.845±6.64 17.620±2.79 41.857±14.79 78.543±4.80 14.414±2.89 56.280±6.35 38.049±15.78 47.583±5.83 9.730±1.25 70.069±21.88 50.388±8.68 24.180±2.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XA CIL_0006XA_0002 CGP 8:71534264-71548024
CIL_0006XB CIL_0006XB_0002 CGP 8:71542930-71558871

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000813 IEA ESCRT I complex
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005856 IEA cytoskeleton
GO:0008289 IEA lipid binding
GO:0015031 IEA protein transport
GO:0016235 IEA aggresome
GO:0017124 IEA SH3 domain binding
GO:0031982 IEA vesicle
GO:0042058 IEA regulation of epidermal growth factor receptor signaling pathway
GO:0043130 IEA ubiquitin binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317040 MVB12A-001 protein_coding Homo_sapiens 0 743
ENST00000524382 MVB12A-006 retained_intron Homo_sapiens 0 525
ENST00000526234 MVB12A-010 retained_intron Homo_sapiens 0 348
ENST00000528911 MVB12A-009 protein_coding Homo_sapiens 0 453
ENST00000529939 MVB12A-008 protein_coding Homo_sapiens 0 597
ENST00000543795 MVB12A-201 protein_coding Homo_sapiens 0 743
ENST00000600514 MVB12A-016 protein_coding Homo_sapiens 0 451

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