C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrator complex subunit 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034328 Ints10-001 ENSMUSG00000031864 10090 + 8:68793929-68829410 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034328
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034328 1.698±0.59 2.336±0.91 1.451±0.02 1.873±0.45 3.286±1.33 1.215±0.00 1.796±0.75 1.265±0.70 1.168±0.19 0.951±0.07 1.630±0.53 1.972±0.86 7.393±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TM CIL_0003TM_0002 CGP 8:68356781-68829410
CIL_0003TK CIL_0003TK_0002 CGP 8:68793929-68907448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0016180 IEA snRNA processing
GO:0032039 IEA integrator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397977 INTS10-001 protein_coding Homo_sapiens 0 2457
ENST00000517546 INTS10-016 retained_intron Homo_sapiens 0 224
ENST00000518424 INTS10-003 nonsense_mediated_decay Homo_sapiens 0 259
ENST00000520670 INTS10-018 protein_coding Homo_sapiens 0 219
ENST00000520827 INTS10-014 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000520985 INTS10-004 retained_intron Homo_sapiens 0 259
ENST00000521008 INTS10-012 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000521758 INTS10-008 processed_transcript Homo_sapiens 0 370
ENST00000522081 INTS10-002 retained_intron Homo_sapiens 0 499
ENST00000522114 INTS10-005 nonsense_mediated_decay Homo_sapiens 8.00001e-42 174
ENST00000522806 INTS10-006 processed_transcript Homo_sapiens 0 217
ENST00000523143 INTS10-009 retained_intron Homo_sapiens 0 418
ENST00000523772 INTS10-015 protein_coding Homo_sapiens 0 224
ENST00000523846 INTS10-007 protein_coding Homo_sapiens 0 560
ENST00000523869 INTS10-017 nonsense_mediated_decay Homo_sapiens 0 409

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