C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrator complex subunit 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397977 INTS10-001 ENSG00000104613 9606 + 8:19817140-19852078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397977
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397977 13.010±0.00 20.841±0.00 1.331±0.00 6.941±0.00 9.819±4.80 7.056±4.25 4.739±3.28 10.194±7.00 7.424±4.00 6.979±4.17 8.133±0.00 9.982±4.88 9.953±1.86 9.123±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TM CIL_0003TM_0001 CGP 8:19404161-19852083
CIL_0003TK CIL_0003TK_0001 CGP 8:19817140-19967258

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016180 IEA:IDA snRNA processing
GO:0032039 IEA:IDA integrator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034328 Ints10-001 protein_coding Mus_musculus 0 2457
ENSMUST00000070713 Ints10-006 protein_coding Mus_musculus 0 2242
ENSMUST00000110241 Ints10-004 protein_coding Mus_musculus 0 2241
ENSMUST00000110242 Ints10-005 protein_coding Mus_musculus 0 2239
ENSMUST00000146322 Ints10-003 retained_intron Mus_musculus 0 525
ENSMUST00000145140 Ints10-002 retained_intron Mus_musculus 0 368
ENSMUST00000147072 Ints10-007 protein_coding Mus_musculus 0 224

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