C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000288_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205084-ENSG00000034713 CGP 9606 16:75536744-75577881
GeneTranscriptPositionBiotype
ENSG00000034713 (GABARAPL2)
GABA(A) receptor-associated protein-like 2 		ENST00000037243 (GABARAPL2-001) 75566351-75577881 protein_coding
ENST00000563744 (GABARAPL2-002) 75566389-75577881 protein_coding
ENST00000565057 (GABARAPL2-004) 75566375-75568405 protein_coding
ENST00000565985 (GABARAPL2-003) 75575608-75577881 processed_transcript
ENST00000568455 (GABARAPL2-006) 75566598-75577530 protein_coding
ENSG00000205084 (TMEM231)
transmembrane protein 231 		ENST00000258173 (TMEM231-001) 75536744-75556286 protein_coding
ENST00000561809 (TMEM231-008) 75545977-75556262 retained_intron
ENST00000562410 (TMEM231-002) 75538136-75556268 nonsense_mediated_decay
ENST00000564318 (TMEM231-007) 75538350-75542044 retained_intron
ENST00000564576 (TMEM231-010) 75541374-75556245 processed_transcript
ENST00000565067 (TMEM231-004) 75539754-75556240 protein_coding
ENST00000568377 (TMEM231-005) 75538151-75556238 protein_coding
ENST00000569294 (TMEM231-009) 75540121-75555271 processed_transcript
ENST00000570006 (TMEM231-006) 75540009-75556233 nonsense_mediated_decay
ENST00000615437 (TMEM231-011) 75554923-75555925 protein_coding
ENSG00000260092 (RP11-77K12.7)
 ENST00000460606 (RP11-77K12.7-001) 75528532-75545428 nonsense_mediated_decay
ENSG00000276408 (RP11-490B18.5)
 ENST00000621911 (RP11-490B18.5-001) 75556392-75557059 lincRNA
ENSG00000276523 (RP11-490B18.6)
 ENST00000611726 (RP11-490B18.6-001) 75572185-75572685 antisense
CIL_000288_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031951-ENSMUSG00000031950 CGP 10090 8:111912018-111953612
GeneTranscriptPositionBiotype
ENSMUSG00000031950 (Gabarapl2)
gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 		ENSMUST00000034428 (Gabarapl2-001) 111940703-111953612 protein_coding
ENSMUST00000130808 (Gabarapl2-003) 111940758-111941771 retained_intron
ENSMUST00000133628 (Gabarapl2-002) 111941068-111952742 retained_intron
ENSMUSG00000031951 (Tmem231)
transmembrane protein 231 		ENSMUST00000034429 (Tmem231-201) 111912018-111933791 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000288_0001ENSG00000034713ENST00000037243ENST00000563744ENST00000565057ENST00000565985ENST00000568455ENSG00000205084ENST00000258173ENST00000561809ENST00000562410ENST00000564318ENST00000564576ENST00000565067ENST00000568377ENST00000569294ENST00000570006ENST00000615437ENSG00000260092ENST00000460606ENSG00000276408ENST00000621911ENSG00000276523ENST00000611726CIL_000288_0002ENSMUSG00000031950ENSMUST00000034428ENSMUST00000130808ENSMUST00000133628ENSMUSG00000031951ENSMUST00000034429
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000288_0001ENSG00000034713ENST00000037243ENST00000565057ENST00000565985ENST00000568455ENSG00000205084ENST00000258173ENST00000562410ENST00000564318ENST00000568377ENSG00000260092ENST00000460606ENSG00000276408ENST00000621911ENSG00000276523ENST00000611726CIL_000288_0002ENSMUSG00000031950ENSMUST00000034428ENSMUST00000133628ENSMUSG00000031951ENSMUST00000034429
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000034713 ENST00000037243 34.533±0.00 29.674±0.00 14.751±0.00 85.040±9.43 29.178±13.94 29.009±15.62 59.590±39.61 35.716±18.81 21.667±4.49 45.058±25.99 29.680±17.24 40.623±27.49 63.262±11.78 51.684±9.46
ENST00000563744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565057 N/A N/A N/A N/A 6.286±0.00 N/A N/A N/A N/A N/A N/A 11.783±0.00 12.307±0.00 13.336±0.00
ENST00000565985 N/A N/A 1.465±0.00 N/A 1.668±0.00 0.996±0.00 N/A N/A N/A 1.574±0.00 N/A 0.643±0.00 N/A N/A
ENST00000568455 20.641±0.00 15.684±0.00 6.996±0.00 66.230±0.00 20.449±0.00 25.161±0.00 N/A 31.512±0.00 N/A 33.695±0.00 14.665±1.51 N/A N/A 33.361±0.00
ENSG00000205084 ENST00000258173 N/A N/A N/A N/A 0.789±0.00 0.604±0.00 N/A N/A N/A N/A N/A 1.811±0.00 N/A N/A
ENST00000561809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562410 N/A N/A 0.720±0.00 N/A N/A 1.607±0.00 N/A N/A N/A 3.801±0.00 N/A N/A N/A N/A
ENST00000564318 N/A N/A N/A N/A 1.506±0.00 N/A N/A N/A N/A N/A 0.253±0.00 0.720±0.00 N/A N/A
ENST00000564576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568377 1.992±0.00 1.869±0.00 N/A 3.514±1.09 1.705±0.00 N/A 1.180±0.00 2.570±0.00 0.768±0.00 4.876±3.63 0.332±0.00 6.127±3.77 2.433±0.26 7.033±1.47
ENST00000569294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260092 ENST00000460606 N/A N/A N/A N/A N/A 3.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000276408 ENST00000621911 0.157±0.00 0.131±0.00 N/A 0.831±0.51 0.340±0.00 0.305±0.00 0.198±0.00 0.278±0.00 0.033±0.00 0.417±0.00 N/A 0.116±0.01 0.122±0.07 1.430±0.29
ENSG00000276523 ENST00000611726 0.135±0.00 1.084±0.00 0.498±0.00 0.550±0.00 1.060±0.91 0.139±0.00 0.359±0.00 0.182±0.04 N/A 0.488±0.00 0.341±0.00 0.210±0.10 0.112±0.03 0.547±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031950 ENSMUST00000034428 12.941±1.57 23.668±1.17 19.176±2.48 20.433±1.21 12.003±4.25 24.107±3.91 17.867±6.08 30.857±4.99 20.174±3.65 26.903±3.76 15.663±8.28 9.291±3.10 16.108±6.29 9.696±3.57
ENSMUST00000130808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133628 15.161±6.99 N/A 24.277±5.08 41.379±17.14 24.155±11.92 N/A 16.487±7.04 12.586±2.55 24.085±7.77 12.523±0.17 37.612±3.34 15.952±19.61 31.244±9.50 5.522±0.76
ENSMUSG00000031951 ENSMUST00000034429 3.122±1.81 5.917±0.78 4.070±0.03 4.699±1.84 2.290±0.68 3.092±0.47 0.946±0.04 5.855±1.16 0.562±0.52 4.719±0.58 0.450±0.08 6.079±1.57 1.690±0.41 6.548±3.08

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