C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000034458  |
Galnt2-001 |
ENSMUSG00000089704 |
10090 | + |
8:124231391-124345722  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008A0 | CIL_0008A0_0002 | VISTA | 8:123980149-124582109 |
| CIL_000611 | CIL_000611_0002 | CGP | 8:124021508-124345724 |
| CIL_000612 | CIL_000612_0002 | CGP | 8:124231391-124439658 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004653 | ISS | polypeptide N-acetylgalactosaminyltransferase activity |
| GO:0005576 | IEA | extracellular region |
| GO:0005796 | TAS | Golgi lumen |
| GO:0006493 | ISS | protein O-linked glycosylation |
| GO:0016021 | IEA | integral component of membrane |
| GO:0030145 | ISS | manganese ion binding |
| GO:0030246 | IEA | carbohydrate binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000136217
|
galnt2-001 | protein_coding | Danio_rerio | 0 | 1016 |
|
ENSDART00000021360
|
galnt2-201 | protein_coding | Danio_rerio | 0 | 950 |
|
ENST00000366672
|
GALNT2-001 | protein_coding | Homo_sapiens | 0 | 2017 |
|
ENST00000485438
|
GALNT2-002 | processed_transcript | Homo_sapiens | 0 | 294 |
|
ENST00000494106
|
GALNT2-004 | processed_transcript | Homo_sapiens | 0 | 649 |
