C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000612_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143641-ENSG00000177614 CGP 9606 1:230057990-230425729
GeneTranscriptPositionBiotype
ENSG00000143641 (GALNT2)
polypeptide N-acetylgalactosaminyltransferase 2
ENST00000366672 (GALNT2-001) 230067209-230282124 protein_coding
ENST00000485438 (GALNT2-002) 230255358-230282120 processed_transcript
ENST00000488903 (GALNT2-005) 230067259-230092033 processed_transcript
ENST00000492568 (GALNT2-003) 230261951-230264972 processed_transcript
ENST00000494106 (GALNT2-004) 230057990-230243427 processed_transcript
ENSG00000177614 (PGBD5)
piggyBac transposable element derived 5
ENST00000391860 (PGBD5-001) 230314482-230425729 protein_coding
ENST00000525115 (PGBD5-002) 230323248-230377645 protein_coding
ENST00000530424 (PGBD5-003) 230323542-230336295 processed_transcript
ENSG00000224407 (RP5-956O18.3)
ENST00000414640 (RP5-956O18.3-001) 230280312-230281893 antisense
ENSG00000227006 (RP5-956O18.2)
ENST00000440729 (RP5-956O18.2-001) 230258694-230268483 antisense
CIL_000612_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000089704-ENSMUSG00000050751 CGP 10090 8:124231391-124439658
GeneTranscriptPositionBiotype
ENSMUSG00000050751 (Pgbd5)
piggyBac transposable element derived 5
ENSMUST00000052580 (Pgbd5-201) 124369049-124433936 protein_coding
ENSMUST00000128312 (Pgbd5-004) 124371869-124375546 processed_transcript
ENSMUST00000136892 (Pgbd5-002) 124370023-124393216 protein_coding
ENSMUST00000140012 (Pgbd5-001) 124369053-124434338 protein_coding
ENSMUST00000140126 (Pgbd5-005) 124371885-124375111 retained_intron
ENSMUST00000172566 (Pgbd5-003) 124369049-124439658 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000612_0001ENSG00000143641ENST00000366672ENST00000485438ENST00000488903ENST00000492568ENST00000494106ENSG00000177614ENST00000391860ENST00000525115ENST00000530424ENSG00000224407ENST00000414640ENSG00000227006ENST00000440729CIL_000612_0002ENSMUSG00000050751ENSMUST00000052580ENSMUST00000128312ENSMUST00000136892ENSMUST00000140012ENSMUST00000140126ENSMUST00000172566
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000612_0001ENSG00000143641ENST00000366672ENST00000485438ENSG00000177614ENST00000391860ENST00000525115ENST00000530424ENSG00000224407ENST00000414640ENSG00000227006ENST00000440729CIL_000612_0002ENSMUSG00000050751ENSMUST00000052580ENSMUST00000136892ENSMUST00000140012ENSMUST00000140126ENSMUST00000172566
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143641 ENST00000366672 19.597±0.00 13.255±0.00 2.059±0.00 5.733±3.72 10.392±5.40 9.461±7.87 4.591±3.13 12.501±3.84 27.984±23.78 8.726±8.08 14.499±9.43 26.455±10.80 31.016±3.44 14.879±4.16
ENST00000485438 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.420±0.00 N/A N/A N/A N/A
ENST00000488903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177614 ENST00000391860 N/A 0.134±0.00 0.049±0.00 5.252±1.82 0.155±0.00 0.075±0.01 0.299±0.21 0.216±0.00 0.427±0.41 0.119±0.00 0.071±0.03 0.162±0.01 0.314±0.03 0.828±0.20
ENST00000525115 N/A N/A 0.605±0.00 N/A 0.344±0.00 0.134±0.08 1.220±1.02 0.638±0.00 1.807±0.00 0.418±0.00 0.277±0.00 0.590±0.35 0.640±0.15 1.808±0.00
ENST00000530424 N/A N/A N/A N/A N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000224407 ENST00000414640 21.079±0.00 17.713±0.00 N/A 6.220±3.72 10.561±5.79 21.257±0.00 7.356±0.00 18.034±0.00 50.542±0.00 17.989±0.00 19.188±0.00 36.656±0.00 27.337±1.54 24.309±0.00
ENSG00000227006 ENST00000440729 0.124±0.00 N/A 0.591±0.00 0.261±0.00 0.298±0.28 0.105±0.02 0.066±0.05 0.347±0.00 0.013±0.00 0.180±0.00 0.131±0.00 0.114±0.01 0.051±0.00 1.270±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000050751 ENSMUST00000052580 N/A 1.139±0.29 1.303±0.10 8.644±9.02 0.044±0.01 0.904±0.57 N/A 0.176±0.02 0.081±0.01 0.132±0.03 0.063±0.04 6.391±2.65 0.051±0.04 3.098±1.96
ENSMUST00000128312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136892 0.081±0.02 N/A N/A N/A 0.039±0.01 0.610±0.08 0.155±0.02 0.036±0.00 N/A 0.137±0.02 0.061±0.00 N/A N/A 2.567±0.00
ENSMUST00000140012 2.195±1.48 2.991±0.65 2.420±0.05 5.304±1.34 0.030±0.00 0.933±0.15 0.080±0.03 0.123±0.03 0.056±0.02 0.079±0.02 0.138±0.01 10.546±3.66 0.222±0.02 2.512±0.51
ENSMUST00000140126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A
ENSMUST00000172566 N/A N/A N/A N/A N/A 1.206±0.00 N/A N/A N/A N/A N/A N/A 0.065±0.05 N/A

Loading