C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034561 Alg9-001 ENSMUSG00000032059 10090 + 9:50775019-50843528 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034561 11.544±1.92 6.910±2.00 8.017±0.29 11.803±6.53 10.751±2.90 8.331±2.77 4.858±0.22 8.877±0.93 6.267±1.26 10.014±1.69 2.106±0.46 7.509±2.19 8.921±1.70 17.134±1.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TF CIL_0002TF_0002 CGP 9:50752758-50775520
CIL_0003WJ CIL_0003WJ_0002 CGP 9:50768236-50843542
CIL_0003WK CIL_0003WK_0002 CGP 9:50775019-50894229

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IEA endoplasmic reticulum
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0052918 IEA dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
GO:0052926 IEA dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398006 ALG9-010 protein_coding Homo_sapiens 0 2097
ENST00000526272 ALG9-003 processed_transcript Homo_sapiens 0 472
ENST00000526587 ALG9-002 protein_coding Homo_sapiens 0 420
ENST00000527294 ALG9-016 processed_transcript Homo_sapiens 0 603
ENST00000527714 ALG9-015 retained_intron Homo_sapiens 0 593
ENST00000530723 ALG9-014 processed_transcript Homo_sapiens 0 272
ENST00000530851 ALG9-004 processed_transcript Homo_sapiens 0 536
ENST00000531154 ALG9-011 protein_coding Homo_sapiens 0 2006
ENST00000532425 ALG9-017 protein_coding Homo_sapiens 0 728
ENST00000612489 ALG9-013 nonsense_mediated_decay Homo_sapiens 0 802
ENST00000613181 ALG9-008 nonsense_mediated_decay Homo_sapiens 0 1107
ENST00000614444 ALG9-001 protein_coding Homo_sapiens 0 2146
ENST00000616540 ALG9-006 protein_coding Homo_sapiens 0 2119
ENST00000618252 ALG9-009 nonsense_mediated_decay Homo_sapiens 0 601
ENST00000619129 ALG9-007 nonsense_mediated_decay Homo_sapiens 0 1764
ENST00000622211 ALG9-001 protein_coding Homo_sapiens 0 2126

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