C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: melanoma cell adhesion molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034650 Mcam-001 ENSMUSG00000032135 10090 + 9:44134562-44142727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034650
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034650 80.152±24.89 10.419±4.21 44.245±6.83 6.649±2.34 29.201±8.08 9.673±1.19 14.269±0.81 8.177±1.07 3.393±2.46 61.678±4.42 5.890±1.30 27.287±3.46 9.786±3.67 3.274±1.31

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003094 IEA glomerular filtration
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005886 ISO plasma membrane
GO:0005925 IEA focal adhesion
GO:0007155 ISO cell adhesion
GO:0007157 ISO heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0009897 IEA external side of plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030335 IEA positive regulation of cell migration
GO:0061042 IEA vascular wound healing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264036 MCAM-001 protein_coding Homo_sapiens 0 1552
ENST00000524940 MCAM-005 processed_transcript Homo_sapiens 9.00054e-42 172
ENST00000525586 MCAM-002 retained_intron Homo_sapiens 0 833
ENST00000528533 MCAM-003 retained_intron Homo_sapiens 0 1114
ENST00000528976 MCAM-016 processed_transcript Homo_sapiens 0 477

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