C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: olfactomedin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034692 Olfm2-201 ENSMUSG00000032172 10090 - 9:20667986-20728219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034692
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034692 2.763±2.07 0.989±0.52 1.739±0.00 28.354±0.00 1.815±1.26 1.461±0.41 0.128±0.03 0.991±0.10 0.141±0.13 6.223±1.83 0.054±0.02 7.625±4.77 0.390±0.42 0.707±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EY CIL_0005EY_0002 CGP 9:20652130-20728219
CIL_000784 CIL_000784_0002 CGP 9:20667986-20815067

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005576 IEA extracellular region
GO:0009306 IEA protein secretion
GO:0030054 IEA cell junction
GO:0032281 IDA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264833 OLFM2-001 protein_coding Homo_sapiens 0 1570
ENST00000590410 OLFM2-004 retained_intron Homo_sapiens 0 547
ENST00000590841 OLFM2-002 protein_coding Homo_sapiens 0 1434
ENST00000592448 OLFM2-003 nonsense_mediated_decay Homo_sapiens 0 551
ENST00000593091 OLFM2-005 protein_coding Homo_sapiens 0 996

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