C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IE
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034745 Myo1e-201 ENSMUSG00000032220 10090 + 9:70207350-70400067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034745
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034745 4.184±1.02 2.721±1.53 5.073±1.12 2.126±1.20 3.358±1.51 16.250±1.99 1.657±0.17 6.392±1.51 3.911±2.72 9.593±1.83 1.748±0.32 12.190±4.16 19.556±11.41 0.382±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001570 IMP vasculogenesis
GO:0001701 IMP in utero embryonic development
GO:0001822 IMP kidney development
GO:0003094 IMP glomerular filtration
GO:0003774 IEA motor activity
GO:0005516 ISS calmodulin binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005856 ISS cytoskeleton
GO:0005911 IDA cell-cell junction
GO:0005912 IDA adherens junction
GO:0006200 IEA ATP catabolic process
GO:0006807 IMP nitrogen compound metabolic process
GO:0006897 ISS endocytosis
GO:0016459 IEA myosin complex
GO:0030097 IMP hemopoiesis
GO:0032836 IMP glomerular basement membrane development
GO:0035091 ISS phosphatidylinositol binding
GO:0035166 IMP post-embryonic hemopoiesis
GO:0042623 ISS ATPase activity, coupled
GO:0045334 ISS clathrin-coated endocytic vesicle
GO:0048008 IMP platelet-derived growth factor receptor signaling pathway
GO:0051015 ISS actin filament binding
GO:0070062 IEA extracellular vesicular exosome
GO:0072015 IMP glomerular visceral epithelial cell development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000052539 myo1ea-201 protein_coding Danio_rerio 0 1594
ENSDART00000044971 myo1eb-001 protein_coding Danio_rerio 0 1173
ENST00000288235 MYO1E-001 protein_coding Homo_sapiens 0 4529
ENST00000558182 MYO1E-009 processed_transcript Homo_sapiens 0 586
ENST00000558571 MYO1E-003 nonsense_mediated_decay Homo_sapiens 0 490
ENST00000558646 MYO1E-002 retained_intron Homo_sapiens 0 438
ENST00000558814 MYO1E-004 processed_transcript Homo_sapiens 0 870
ENST00000559269 MYO1E-005 protein_coding Homo_sapiens 0 754
ENST00000559412 MYO1E-010 protein_coding Homo_sapiens 8.99998e-41 171
ENST00000560642 MYO1E-007 retained_intron Homo_sapiens 0 531
ENST00000560749 MYO1E-008 protein_coding Homo_sapiens 0 658

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