C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IE, a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000052539 myo1ea-201 ENSDARG00000036179 7955 - 7:31968738-32059207 protein_coding

Danio rerio EnsemblZv9

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Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052539
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052539 2.238±0.60 11.867±4.39 2.365±0.68 0.175±0.00 0.881±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000503 CIL_000503_0001 CGP 7:31962886-32059207

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003094 IGI glomerular filtration
GO:0003774 IEA motor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0016459 IEA myosin complex
GO:0032835 IGI glomerulus development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034745 Myo1e-201 protein_coding Mus_musculus 0 1594
ENSMUST00000087605 Myo1f-001 protein_coding Mus_musculus 0 887
ENSMUST00000173372 Myo1f-002 nonsense_mediated_decay Mus_musculus 0 863
ENST00000288235 MYO1E-001 protein_coding Homo_sapiens 0 1522
ENST00000558571 MYO1E-003 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000558646 MYO1E-002 retained_intron Homo_sapiens 2e-33 147

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