C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034859 Fbxo22-001 ENSMUSG00000032309 10090 + 9:55208925-55224433 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034859
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034859 14.678±0.89 8.659±3.00 13.651±1.29 11.750±4.47 13.198±1.24 5.723±2.83 6.955±0.59 12.789±1.24 9.614±1.76 5.517±1.35 6.742±1.53 8.264±2.87 22.076±10.75 2.063±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024C CIL_00024C_0002 CGP 9:55148854-55224433
CIL_000249 CIL_000249_0002 CGP 9:55208925-55326844

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006913 IDA nucleocytoplasmic transport
GO:0009267 IDA cellular response to starvation
GO:0010830 IMP regulation of myotube differentiation
GO:0032436 IMP positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0048742 IMP regulation of skeletal muscle fiber development
GO:2000060 IMP positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308275 FBXO22-001 protein_coding Homo_sapiens 0 1472
ENST00000453211 FBXO22-003 protein_coding Homo_sapiens 0 987
ENST00000561885 FBXO22-008 nonsense_mediated_decay Homo_sapiens 0 628
ENST00000564220 FBXO22-009 protein_coding Homo_sapiens 0 315
ENST00000565036 FBXO22-006 protein_coding Homo_sapiens 0 359
ENST00000569022 FBXO22-004 nonsense_mediated_decay Homo_sapiens 0 1195
ENST00000569054 FBXO22-007 protein_coding Homo_sapiens 0 863
ENST00000569749 FBXO22-002 nonsense_mediated_decay Homo_sapiens 0 483

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